Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p43060 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-63 246.1 117 100.0
BolC6t39130H Brassica oleracea HOM05D000171 ORTHO05D000101 6.8e-28 127.5 65 90.8
BcaB05g24243 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-10 70.1 61 60.7
A02p14050 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-10 69.3 62 58.1
BraA02t06466Z Brassica rapa HOM05D000171 ORTHO05D000101 2.2e-10 69.3 62 58.1
BcaC03g14813 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-10 68.6 62 59.7
A01p22790 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-10 68.6 61 59.0
C02p22650 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-10 68.6 62 59.7
BolC2t08418H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-10 68.6 62 59.7
BraA01t02191Z Brassica rapa HOM05D000171 ORTHO05D000101 3.7e-10 68.6 61 59.0
AL8G15550 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-09 67.0 61 55.7
A09p34040 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-09 66.6 76 52.6
BraA09t38949Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-09 66.6 76 52.6
CARHR036660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.2e-09 63.9 60 56.7
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.2e-08 63.5 68 48.5
Carub.0004s1365 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-08 63.2 63 50.8
BcaB06g28591 Brassica carinata HOM05D000171 ORTHO05D000101 3.5e-08 62.0 70 50.0
A05p25180 Brassica napus HOM05D000171 ORTHO05D000101 3.5e-08 62.0 64 50.0
CARHR036630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.5e-08 62.0 64 51.6
BcaB02g07174 Brassica carinata HOM05D000171 ORTHO05D000101 4.6e-08 61.6 66 53.0
BcaB07g32881 Brassica carinata HOM05D000171 ORTHO05D000101 4.6e-08 61.6 64 54.7
BolC2t08420H Brassica oleracea HOM05D000171 ORTHO05D000101 4.6e-08 61.6 61 54.1
Thhalv10022123m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.6e-08 61.6 63 52.4
BolC4t27646H Brassica oleracea HOM05D000171 ORTHO05D000101 7.8e-08 60.8 63 52.4
CARHR219450 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.8e-08 60.8 59 54.2
AT2G31470 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.0e-07 60.5 61 52.5
BcaC02g07948 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-07 60.5 64 51.6
BolC4t27640H Brassica oleracea HOM05D000171 ORTHO05D000101 1.0e-07 60.5 64 51.6
Carub.0001s3582 Capsella rubella HOM05D000171 ORTHO05D000101 1.0e-07 60.5 65 52.3
BcaC08g47087 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-07 60.1 63 49.2
BraA04t17985Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-07 60.1 66 50.0
CARHR125110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.3e-07 60.1 63 54.0
CARHR126110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.3e-07 60.1 68 51.5
Thhalv10007859m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-07 60.1 60 50.0
A03p26650 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-07 59.7 64 50.0
BolC3t15534H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-07 59.7 64 50.0
BraA03t11876Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-07 59.7 64 50.0
BcaB06g26402 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-07 59.3 63 47.6
AT1G46984 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.0e-07 58.9 61 55.7
BcaB02g09590 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-07 58.9 65 52.3
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 3.0e-07 58.9 60 53.3
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 3.0e-07 58.9 60 53.3
BraA05t21470Z Brassica rapa HOM05D000171 ORTHO05D000101 3.0e-07 58.9 64 50.0
BraA10t42573Z Brassica rapa HOM05D000171 ORTHO05D000101 3.0e-07 58.9 59 54.2
Thhalv10020859m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.0e-07 58.9 66 47.0
SpUn0074_0030 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.0e-07 58.9 67 53.7
AL4G14910 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.9e-07 58.5 60 53.3
AT1G47800 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.9e-07 58.5 59 50.8
AT1G47810 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.9e-07 58.5 59 47.5
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-07 58.5 63 46.0
BcaC02g07953 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-07 58.5 66 47.0
BcaC09g50159 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-07 58.5 61 49.2
A04p24670 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 66 47.0
A10p03020 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 59 54.2
C01p28340 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 61 49.2
C03p65580 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 62 50.0
C04p61570 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 66 47.0
C04p61620 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 63 50.8
C05p02780 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-07 58.5 59 54.2
BolC5t29060H Brassica oleracea HOM05D000171 ORTHO05D000101 3.9e-07 58.5 59 54.2
Thhalv10019461m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.9e-07 58.5 70 55.7
Sp1g34250 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.9e-07 58.5 63 49.2
BcaC02g07931 Brassica carinata HOM05D000171 ORTHO05D000101 5.1e-07 58.2 66 50.0
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 5.1e-07 58.2 59 50.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 5.1e-07 58.2 59 50.8
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 5.1e-07 58.2 59 50.8
CARHR265610 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.1e-07 58.2 60 50.0
AL1G45350 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.6e-07 57.8 59 49.2
AL4G16470 Arabidopsis lyrata HOM05D000171 ORTHO05D031361 6.6e-07 57.8 60 55.0
BcaB03g13759 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-07 57.8 64 50.0
BcaB03g15211 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-07 57.8 61 52.5
BcaC05g24639 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-07 57.8 71 45.1
A04p24830 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-07 57.8 66 50.0
C05p01800 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-07 57.8 71 45.1
BolC4t27669H Brassica oleracea HOM05D000171 ORTHO05D000101 6.6e-07 57.8 70 50.0
AL2G14020 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.6e-07 57.4 67 47.8
BcaB06g28549 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-07 57.4 64 50.0
A04p24910 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-07 57.4 69 47.8
C03p21070 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-07 57.4 63 44.4
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 8.6e-07 57.4 63 44.4
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 8.6e-07 57.4 68 47.1
BraA04t18005Z Brassica rapa HOM05D000171 ORTHO05D000101 8.6e-07 57.4 69 47.8
Thhalv10012047m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.6e-07 57.4 62 51.6
AT1G53790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.1e-06 57.0 62 50.0
BcaC01g04937 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-06 57.0 64 48.4
C03p31920 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-06 57.0 64 48.4
BraA04t17990Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-06 57.0 64 51.6
BraA05t22337Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-06 57.0 71 45.1
Carub.0001s2013 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.0 62 51.6
Carub.0001s2927 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.0 60 50.0
CARHR044030 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.1e-06 57.0 61 54.1
Thhalv10011962m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-06 57.0 70 48.6
AL2G14000 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-06 56.6 67 49.3
BcaC02g07929 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-06 56.6 64 50.0
A04p24820 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-06 56.6 62 50.0
C04p61820 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-06 56.6 64 50.0
C09p71120 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-06 56.6 66 47.0
BolC4t27665H Brassica oleracea HOM05D000171 ORTHO05D000101 1.5e-06 56.6 64 50.0
BraA04t17999Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-06 56.6 62 50.0
Carub.0002s0293 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 56.6 65 49.2
CARHR158400 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.5e-06 56.6 63 49.2
CARHR261660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.5e-06 56.6 67 47.8
Thhalv10011121m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.5e-06 56.6 58 51.7
Sp1g33140 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.5e-06 56.6 74 43.2
Aa31LG11G6200 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.9e-06 56.2 59 40.7
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 1.9e-06 56.2 35 74.3
C04p61610 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-06 56.2 64 51.6
C04p61790 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-06 56.2 66 48.5
Carub.0005s2800 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-06 56.2 65 52.3
Sp5g12630 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.9e-06 56.2 63 47.6
A05p14170 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-06 55.8 66 48.5
A05p25840 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-06 55.8 64 48.4
C04p61880 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-06 55.8 70 48.6
BolC4t27662H Brassica oleracea HOM05D000171 ORTHO05D000101 2.5e-06 55.8 66 48.5
Carub.0001s0357 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-06 55.8 63 47.6
Thhalv10012205m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-06 55.8 70 48.6
Thhalv10019545m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-06 55.8 69 50.7
Thhalv10027150m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-06 55.8 65 53.8
AT5G65850 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.3e-06 55.5 65 47.7
BcaB06g28579 Brassica carinata HOM05D000171 ORTHO05D000101 3.3e-06 55.5 63 47.6
A10p30640 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-06 55.5 67 49.3
BolC4t27641H Brassica oleracea HOM05D000171 ORTHO05D000101 3.3e-06 55.5 65 49.2
BolC9t59874H Brassica oleracea HOM05D000171 ORTHO05D000101 3.3e-06 55.5 67 49.3
BraA05t20288Z Brassica rapa HOM05D000171 ORTHO05D000101 3.3e-06 55.5 65 49.2
BraA10t45104Z Brassica rapa HOM05D000171 ORTHO05D000101 3.3e-06 55.5 67 49.3
Thhalv10009646m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.3e-06 55.5 60 53.3
Aa31LG1G23370 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.3e-06 55.1 70 44.3
BcaC02g07927 Brassica carinata HOM05D000171 ORTHO05D000101 4.3e-06 55.1 64 48.4
BcaC05g27918 Brassica carinata HOM05D000171 ORTHO05D000101 4.3e-06 55.1 63 47.6
C04p61870 Brassica napus HOM05D000171 ORTHO05D000101 4.3e-06 55.1 64 48.4
C05p39240 Brassica napus HOM05D000171 ORTHO05D000101 4.3e-06 55.1 63 47.6
BolC4t27668H Brassica oleracea HOM05D000171 ORTHO05D000101 4.3e-06 55.1 64 48.4
BolC5t32658H Brassica oleracea HOM05D000171 ORTHO05D000101 4.3e-06 55.1 63 47.6
Carub.0001s4431 Capsella rubella HOM05D000171 ORTHO05D000101 4.3e-06 55.1 62 51.6
Carub.0002s0292 Capsella rubella HOM05D000171 ORTHO05D000101 4.3e-06 55.1 65 49.2
Carub.0006s0263 Capsella rubella HOM05D000171 ORTHO05D000101 4.3e-06 55.1 59 49.2
CARHR213730 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.3e-06 55.1 58 51.7
AL4G27390 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.6e-06 54.7 64 48.4
AL5G29210 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.6e-06 54.7 63 44.4
BcaB02g09153 Brassica carinata HOM05D000171 ORTHO05D000101 5.6e-06 54.7 59 49.2
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 5.6e-06 54.7 68 47.1
BcaC05g30178 Brassica carinata HOM05D000171 ORTHO05D000101 5.6e-06 54.7 63 46.0
BcaC08g44127 Brassica carinata HOM05D000171 ORTHO05D000101 5.6e-06 54.7 63 50.8
A05p17940 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 63 50.8
A05p35260 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 71 43.7
A08p16640 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 66 42.4
C03p85560 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 66 42.4
C05p40240 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 64 46.9
C06p15250 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 54.7 63 50.8
BolC3t20844H Brassica oleracea HOM05D000171 ORTHO05D000101 5.6e-06 54.7 66 42.4
BolC5t32766H Brassica oleracea HOM05D000171 ORTHO05D000101 5.6e-06 54.7 64 46.9
BraA08t33629Z Brassica rapa HOM05D000171 ORTHO05D000101 5.6e-06 54.7 66 42.4
CARHR219290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.6e-06 54.7 66 50.0
Thhalv10009628m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.6e-06 54.7 63 50.8
Thhalv10009932m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.6e-06 54.7 60 45.0
Thhalv10019467m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.6e-06 54.7 60 46.7
Thhalv10025406m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.6e-06 54.7 66 51.5
AL3G14200 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-06 54.3 67 43.3
AL5G29234 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-06 54.3 63 46.0
C01p28330 Brassica napus HOM05D000171 ORTHO05D000101 7.3e-06 54.3 59 50.8
BolC1t02762H Brassica oleracea HOM05D000171 ORTHO05D000101 7.3e-06 54.3 59 50.8
BraA05t21397Z Brassica rapa HOM05D000171 ORTHO05D000101 7.3e-06 54.3 64 45.3
Carub.0004s1364 Capsella rubella HOM05D000171 ORTHO05D000101 7.3e-06 54.3 64 48.4
Thhalv10003077m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-06 54.3 64 46.9
Thhalv10009326m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-06 54.3 61 47.5
Thhalv10009370m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-06 54.3 59 49.2
Thhalv10009377m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-06 54.3 60 48.3
Thhalv10009439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-06 54.3 60 50.0
AT1G31000 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.5e-06 53.9 66 42.4
AT3G49450 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.5e-06 53.9 63 46.0
BcaB02g10391 Brassica carinata HOM05D000171 ORTHO05D000101 9.5e-06 53.9 61 49.2
BcaB02g10924 Brassica carinata HOM05D000171 ORTHO05D000101 9.5e-06 53.9 65 46.2
BcaB06g28548 Brassica carinata HOM05D000171 ORTHO05D000101 9.5e-06 53.9 59 49.2
BcaC02g07932 Brassica carinata HOM05D000171 ORTHO05D000101 9.5e-06 53.9 62 46.8
C04p61780 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-06 53.9 62 46.8
BolC4t27661H Brassica oleracea HOM05D000171 ORTHO05D000101 9.5e-06 53.9 62 46.8
BraA04t18004Z Brassica rapa HOM05D000171 ORTHO05D000101 9.5e-06 53.9 64 48.4
Carub.0006s2776 Capsella rubella HOM05D000171 ORTHO05D000101 9.5e-06 53.9 70 45.7
CARHR197660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.5e-06 53.9 69 39.1


User provided reference genes

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