Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 0.0e+00 1106.3 551 100.0
BolC6t39163H Brassica oleracea HOM05D008960 ORTHO05D033710 2.6e-194 682.6 334 99.4
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 2.4e-139 500.0 479 63.0
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 9.7e-133 478.0 369 75.6
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 3.4e-130 469.5 369 72.4
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 3.4e-130 469.5 369 72.4
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 7.6e-130 468.4 366 74.0
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 7.6e-130 468.4 366 74.0
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 7.1e-59 232.6 191 67.5
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 6.2e-55 219.5 156 72.4
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 6.2e-55 219.5 156 73.1
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 6.2e-55 219.5 156 73.1
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 1.1e-54 218.8 156 73.1
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 2.4e-54 217.6 156 72.4
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 7.6e-53 212.6 156 71.8
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 2.4e-51 207.6 212 56.1
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 7.1e-51 206.1 156 69.9
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 6.6e-49 199.5 216 54.2
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 1.1e-48 198.7 206 58.3
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 1.1e-48 198.7 206 58.3
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 4.3e-48 196.8 206 58.3
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 2.1e-39 167.9 95 93.7
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 6.2e-39 166.4 95 92.6
BraA07t30534Z Brassica rapa HOM05D008960 ORTHO05D033710 5.8e-37 159.8 92 87.0
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 1.3e-36 158.7 92 89.1
C07p37270 Brassica napus HOM05D008960 ORTHO05D041838 1.1e-35 155.6 180 55.0
BolC7t44237H Brassica oleracea HOM05D008960 ORTHO05D041838 1.1e-35 155.6 180 55.0
BraA07t31033Z Brassica rapa HOM05D000125 ORTHO05D000120 1.1e-35 155.6 72 100.0
A07p34070 Brassica napus HOM05D008960 ORTHO05D000120 5.4e-35 153.3 71 100.0
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 2.9e-28 131.0 101 69.3
BcaNung05074 Brassica carinata HOM05D000125 ORTHO05D000120 4.9e-28 130.2 73 82.2
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 5.1e-25 120.2 219 43.8
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 5.1e-25 120.2 219 43.8
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 5.6e-24 116.7 95 65.3
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 3.7e-23 114.0 245 39.6
A06p35440 Brassica napus HOM05D009661 ORTHO05D018783 3.1e-22 110.9 232 41.4
BraA06t26467Z Brassica rapa HOM05D009661 ORTHO05D018783 3.1e-22 110.9 232 41.4
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 1.0e-20 105.9 325 35.1
C06p07090 Brassica napus HOM05D009661 ORTHO05D020160 1.3e-20 105.5 190 43.2
C06p42710 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-17 95.5 74 67.6
BolC6t39167H Brassica oleracea HOM05D000125 ORTHO05D000120 1.3e-17 95.5 74 67.6
C01p02030 Brassica napus HOM05D009661 ORTHO05D020160 1.5e-16 92.0 101 53.5
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 2.5e-16 91.3 113 55.8
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 2.8e-15 87.8 113 53.1
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 4.8e-15 87.0 112 54.5
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 4.8e-15 87.0 112 54.5
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 1.1e-14 85.9 113 53.1
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 1.4e-14 85.5 90 61.1
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 3.1e-14 84.3 113 51.3
C07p48840 Brassica napus HOM05D011932 ORTHO05D024153 1.5e-13 82.0 112 52.7
BolC7t45392H Brassica oleracea HOM05D011932 ORTHO05D024153 1.5e-13 82.0 112 52.7
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 3.4e-13 80.9 113 52.2
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 4.5e-13 80.5 87 55.2
BolC6t35800H Brassica oleracea HOM05D009661 ORTHO05D020160 8.5e-12 76.3 128 43.0
BraA07t31746Z Brassica rapa HOM05D008960 ORTHO05D108237 8.5e-12 76.3 60 65.0
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 2.5e-11 74.7 83 57.8
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 4.2e-11 73.9 68 58.8
BolC6t38926H Brassica oleracea HOM05D009661 ORTHO05D018783 4.2e-11 73.9 128 42.2
C06p38270 Brassica napus HOM05D009661 ORTHO05D018783 5.5e-11 73.6 126 42.1
A06p27480 Brassica napus HOM05D011932 ORTHO05D096777 7.2e-11 73.2 72 61.1
BolC6t37706H Brassica oleracea HOM05D009661 ORTHO05D020160 7.2e-11 73.2 128 42.2
A07p16610 Brassica napus HOM05D009661 ORTHO05D018783 9.4e-11 72.8 141 41.1
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 1.6e-10 72.0 79 53.2
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 2.7e-10 71.2 79 51.9
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 3.6e-10 70.9 127 40.2
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 3.6e-10 70.9 76 59.2
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 3.6e-10 70.9 120 41.7
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 4.6e-10 70.5 120 41.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 1.0e-09 69.3 76 57.9
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 2.3e-09 68.2 120 40.8
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 3.9e-09 67.4 92 51.1
C07p18550 Brassica napus HOM05D008960 ORTHO05D103607 8.8e-09 66.2 51 62.7
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 5.3e-06 57.0 65 53.8


User provided reference genes

Program Settings