Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 1.2e-50 203.0 108 100.0
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 5.8e-50 200.7 108 99.1
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 6.9e-43 177.2 108 88.0
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 6.9e-43 177.2 108 88.0
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 9.0e-43 176.8 93 97.8
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 1.2e-42 176.4 92 100.0
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 2.0e-42 175.6 92 97.8
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 2.6e-42 175.3 93 97.8
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 4.5e-42 174.5 92 95.7
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.7e-41 172.6 92 94.6
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.4e-40 169.5 92 92.4
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 2.5e-40 168.7 92 92.4
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 1.6e-39 166.0 92 90.2
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 4.3e-37 157.9 92 85.9
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 4.2e-32 141.4 92 84.8
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 7.9e-31 137.1 73 94.5
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 5.7e-29 131.0 92 78.3
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 8.5e-25 117.1 84 67.9
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 8.5e-25 117.1 84 67.9
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 8.5e-25 117.1 84 67.9
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 1.9e-24 115.9 82 69.5
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 5.5e-24 114.4 88 62.5
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 5.5e-24 114.4 82 65.9
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 5.5e-24 114.4 82 65.9
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.2e-23 113.2 84 64.3
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.2e-23 113.2 84 64.3
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 1.2e-23 113.2 83 65.1
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 1.2e-23 113.2 82 67.1
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 1.2e-23 113.2 82 65.9
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 2.7e-23 112.1 84 65.5
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.6e-23 111.7 89 62.9
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 4.7e-23 111.3 84 63.1
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 4.7e-23 111.3 84 63.1
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 4.7e-23 111.3 82 64.6
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 6.1e-23 110.9 90 58.9
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 6.1e-23 110.9 82 64.6
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 6.1e-23 110.9 82 67.1
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 7.9e-23 110.5 84 64.3
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 7.9e-23 110.5 84 65.5
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 7.9e-23 110.5 81 64.2
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 1.0e-22 110.2 82 64.6
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.0e-22 110.2 90 57.8
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 1.0e-22 110.2 82 68.3
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.8e-22 109.4 82 62.2
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 3.0e-22 108.6 82 64.6
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 3.9e-22 108.2 88 59.1
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 3.9e-22 108.2 82 64.6
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 5.1e-22 107.8 108 53.7
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 6.7e-22 107.5 82 62.2
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 6.7e-22 107.5 88 58.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 6.7e-22 107.5 82 59.8
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 6.7e-22 107.5 82 63.4
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.8e-22 107.1 79 65.8
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.8e-22 107.1 79 65.8
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 8.8e-22 107.1 85 60.0
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.1e-21 106.7 82 62.2
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.5e-21 106.3 85 60.0
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.5e-21 106.3 82 63.4
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 2.0e-21 105.9 84 59.5
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 2.6e-21 105.5 92 57.6
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 2.6e-21 105.5 84 59.5
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 2.6e-21 105.5 82 62.2
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 2.6e-21 105.5 82 63.4
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 3.3e-21 105.1 87 63.2
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 3.3e-21 105.1 87 57.5
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 3.3e-21 105.1 78 64.1
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 4.4e-21 104.8 82 61.0
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 5.7e-21 104.4 82 61.0
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 7.4e-21 104.0 82 61.0
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 7.4e-21 104.0 82 61.0
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 1.3e-20 103.2 82 59.8
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.3e-20 103.2 84 57.1
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.7e-20 102.8 82 61.0
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.7e-20 102.8 91 56.0
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.2e-20 102.4 82 61.0
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 2.2e-20 102.4 82 59.8
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.2e-20 102.4 82 59.8
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 2.2e-20 102.4 78 64.1
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.8e-20 102.1 81 59.3
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 3.7e-20 101.7 82 57.3
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 6.3e-20 100.9 87 62.1
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 6.3e-20 100.9 82 58.5
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 6.3e-20 100.9 82 58.5
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 6.3e-20 100.9 89 56.2
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 8.2e-20 100.5 82 56.1
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.1e-19 100.1 82 59.8
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.8e-19 99.4 81 56.8
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.8e-19 99.4 81 56.8
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 2.4e-19 99.0 81 56.8
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.4e-19 99.0 82 56.1
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 5.3e-19 97.8 82 57.3
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 6.9e-19 97.4 82 57.3
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 6.9e-19 97.4 84 53.6
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 9.1e-19 97.1 78 60.3
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.2e-18 96.7 83 55.4
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.2e-18 96.7 78 60.3
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.5e-18 96.3 82 56.1
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 1.5e-18 96.3 82 56.1
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.6e-18 95.5 82 56.1
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 2.6e-18 95.5 86 52.3
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 3.4e-18 95.1 82 54.9
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 7.7e-18 94.0 82 54.9
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 1.0e-17 93.6 70 62.9
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 1.3e-17 93.2 85 55.3
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 1.3e-17 93.2 69 65.2
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.7e-17 92.8 84 51.2
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.4e-16 89.7 82 51.2
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 1.4e-16 89.7 82 52.4
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 1.2e-15 86.7 85 49.4
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.0e-14 83.6 77 50.6
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 1.7e-12 76.3 67 55.2
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 1.1e-11 73.6 57 57.9
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 4.1e-11 71.6 85 42.4
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.6e-10 69.7 47 68.1
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 5.9e-10 67.8 82 43.9
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.9e-09 65.5 56 58.9
C02p23080 Brassica napus HOM05D046150 ORTHO05D042944 6.5e-09 64.3 31 96.8
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 8.5e-09 63.9 56 55.4
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 2.5e-08 62.4 55 54.5
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 4.2e-08 61.6 66 50.0
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 4.2e-08 61.6 47 59.6
BolC2t08450H Brassica oleracea HOM05D046150 ORTHO05D042944 1.6e-07 59.7 31 90.3
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.8e-06 53.9 45 51.1
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 8.8e-06 53.9 56 48.2


User provided reference genes

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