Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 8.3e-119 430.6 259 100.0
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 8.3e-119 430.6 259 100.0
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 1.3e-116 423.3 259 95.4
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 3.9e-116 421.8 259 97.3
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 1.2e-112 410.2 258 95.3
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 3.0e-108 395.6 261 84.7
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 4.3e-83 312.0 258 66.3
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 1.3e-82 310.5 259 66.8
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 1.4e-81 307.0 258 66.3
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 1.8e-81 306.6 259 65.6
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 6.9e-81 304.7 258 64.7
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 2.0e-80 303.1 258 65.5
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 2.0e-80 303.1 258 65.5
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 3.2e-78 295.8 224 74.6
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 2.3e-76 289.7 259 61.4
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 5.1e-76 288.5 258 62.8
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 4.6e-69 265.4 267 59.6
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 5.1e-68 261.9 234 60.3
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.9e-62 243.4 245 54.7
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 1.3e-47 194.1 251 47.4
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 9.8e-19 98.2 160 35.6
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 2.2e-18 97.1 169 36.1
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 2.8e-18 96.7 157 34.4
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 1.1e-17 94.7 155 36.8
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 4.1e-17 92.8 155 36.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 7.0e-17 92.0 163 35.6
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.2e-16 91.3 169 32.5
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.2e-16 91.3 164 37.8
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 1.6e-16 90.9 163 37.4
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 3.5e-16 89.7 154 35.1
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 3.5e-16 89.7 157 36.3
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 5.9e-16 89.0 154 34.4
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 7.7e-16 88.6 159 32.7
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.3e-15 87.8 156 31.4
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 1.7e-15 87.4 158 33.5
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 2.3e-15 87.0 164 35.4
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 2.3e-15 87.0 156 34.0
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 2.3e-15 87.0 204 30.4
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 2.3e-15 87.0 158 34.2
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.8e-15 86.3 158 34.8
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 3.8e-15 86.3 154 34.4
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 5.0e-15 85.9 166 31.9
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 8.6e-15 85.1 158 32.9
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 1.5e-14 84.3 163 35.0
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 1.5e-14 84.3 154 34.4
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 7.2e-14 82.0 168 32.7
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 7.2e-14 82.0 162 35.8
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 9.5e-14 81.6 165 32.7
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 1.6e-13 80.9 157 33.1
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.6e-13 80.9 157 35.0
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 1.6e-13 80.9 155 33.5
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.6e-13 80.9 160 35.0
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 2.8e-13 80.1 156 35.3
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.6e-13 79.7 161 33.5
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 6.1e-13 79.0 165 33.3
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 6.1e-13 79.0 161 30.4
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 6.1e-13 79.0 166 33.1
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.8e-12 77.4 158 31.6
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.0e-12 76.6 158 34.8
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.0e-12 76.6 158 32.3
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 3.0e-12 76.6 158 32.3
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 3.0e-12 76.6 164 30.5
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 3.0e-12 76.6 99 41.4
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 5.2e-12 75.9 161 32.9
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 8.9e-12 75.1 164 30.5
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 8.9e-12 75.1 169 33.1
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 1.2e-11 74.7 145 31.0
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 1.5e-11 74.3 122 33.6
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 2.0e-11 73.9 168 30.4
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 2.6e-11 73.6 206 28.6
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.6e-11 73.6 156 31.4
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 2.6e-11 73.6 156 31.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 3.4e-11 73.2 160 31.9
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 5.7e-11 72.4 160 33.8
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 7.5e-11 72.0 169 32.5
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 4.9e-10 69.3 254 29.5
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.4e-09 67.8 164 29.9
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.4e-09 67.8 82 42.7
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 2.4e-09 67.0 112 35.7
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 2.4e-09 67.0 137 31.4
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 3.2e-09 66.6 164 29.9
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 3.2e-09 66.6 164 29.9
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 3.2e-09 66.6 162 31.5
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 3.2e-09 66.6 172 29.7
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 4.1e-09 66.2 156 30.8
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 1.2e-08 64.7 214 24.8
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 2.7e-08 63.5 116 38.8
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 3.5e-08 63.2 82 41.5
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 3.5e-08 63.2 156 28.2
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 4.5e-08 62.8 142 38.7
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 5.9e-08 62.4 99 36.4
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.0e-07 61.6 167 29.3
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 1.0e-07 61.6 125 35.2
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 9.5e-06 55.1 147 27.2
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 9.5e-06 55.1 161 28.6


User provided reference genes

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