Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 1.5e-104 382.9 196 100.0
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 6.3e-103 377.5 196 98.5
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 1.6e-101 372.9 196 97.4
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 2.0e-96 355.9 201 94.5
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 2.8e-95 352.1 199 94.0
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 1.0e-92 343.6 199 91.5
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.6e-82 309.7 197 83.2
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 2.1e-74 282.7 203 77.8
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 1.5e-64 250.0 203 69.5
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 2.0e-64 249.6 200 69.5
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 2.7e-61 239.2 201 65.7
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 3.5e-61 238.8 195 68.2
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 1.9e-51 206.5 188 61.2
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 5.3e-49 198.4 193 59.6
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 7.1e-46 188.0 198 56.1
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 9.3e-46 187.6 199 53.3
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 7.8e-45 184.5 199 55.8
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.0e-44 184.1 199 56.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.0e-44 184.1 190 56.3
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 6.6e-44 181.4 199 55.8
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 1.9e-43 179.9 190 56.8
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 5.6e-43 178.3 198 54.0
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 8.1e-42 174.5 197 55.3
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 1.4e-41 173.7 202 54.0
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 1.5e-40 170.2 190 50.0
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 2.0e-40 169.9 188 53.2
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 7.6e-40 167.9 189 51.3
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 9.9e-40 167.5 199 52.8
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 1.3e-39 167.2 170 54.7
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.7e-39 166.8 202 51.0
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 2.2e-39 166.4 195 50.8
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 2.9e-39 166.0 189 52.9
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 2.9e-39 166.0 209 49.8
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 3.8e-39 165.6 191 52.9
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 4.9e-39 165.2 189 54.0
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.4e-38 163.7 189 54.0
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 1.9e-38 163.3 196 50.5
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 1.9e-38 163.3 189 52.9
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 2.4e-38 162.9 193 52.3
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.4e-38 162.9 166 53.6
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 3.2e-38 162.5 161 54.0
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 4.2e-38 162.2 191 51.3
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 4.2e-38 162.2 202 50.0
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 5.4e-38 161.8 195 48.2
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 7.1e-38 161.4 189 51.3
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 9.3e-38 161.0 209 49.3
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.2e-37 160.6 148 52.7
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 1.6e-37 160.2 198 50.0
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 2.1e-37 159.8 191 50.8
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.1e-37 159.8 131 61.1
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 3.5e-37 159.1 190 50.5
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 1.8e-36 156.8 150 52.7
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 5.1e-36 155.2 190 47.9
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 5.1e-36 155.2 198 49.5
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 8.7e-36 154.5 190 50.5
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 8.7e-36 154.5 183 49.7
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 8.7e-36 154.5 180 48.3
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 1.1e-35 154.1 135 57.8
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 1.5e-35 153.7 169 53.8
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 1.5e-35 153.7 189 49.2
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 4.3e-35 152.1 229 44.5
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 4.3e-35 152.1 173 52.0
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 4.3e-35 152.1 169 49.1
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 5.6e-35 151.8 178 51.7
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 6.2e-34 148.3 192 45.8
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 6.2e-34 148.3 182 46.7
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 2.4e-33 146.4 163 50.9
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 4.0e-33 145.6 161 52.8
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 6.9e-33 144.8 161 52.8
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 9.0e-33 144.4 189 43.9
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 1.5e-32 143.7 168 49.4
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 2.6e-32 142.9 163 49.1
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 7.6e-32 141.4 198 44.9
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 1.7e-31 140.2 140 48.6
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.7e-31 140.2 197 46.7
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 1.7e-31 140.2 237 40.5
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.1e-30 137.5 189 46.6
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 3.2e-30 136.0 111 61.3
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 1.2e-29 134.0 183 47.0
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.2e-29 134.0 153 46.4
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.7e-29 132.9 221 40.7
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 2.7e-29 132.9 198 43.4
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 5.1e-28 128.6 102 61.8
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.1e-27 127.5 180 43.9
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 1.5e-27 127.1 157 45.9
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 2.8e-26 122.9 192 39.6
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 8.2e-26 121.3 153 46.4
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 8.7e-20 101.3 138 47.1
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 7.4e-19 98.2 56 87.5
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.3e-18 97.4 84 58.3
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 9.0e-17 91.3 105 47.6
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 1.5e-16 90.5 144 45.1
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 2.0e-16 90.1 108 43.5
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 4.5e-16 89.0 108 50.9
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.0e-15 87.8 83 53.0
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.3e-15 87.4 138 39.1
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 2.9e-15 86.3 72 56.9
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 8.5e-15 84.7 142 40.1
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 1.9e-14 83.6 143 32.9
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 1.9e-14 83.6 71 56.3
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 3.2e-14 82.8 111 38.7
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 5.5e-14 82.0 110 48.2
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 2.1e-13 80.1 76 55.3
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 1.8e-12 77.0 115 40.0
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 1.8e-12 77.0 115 40.0
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 3.0e-12 76.3 160 38.8
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 3.9e-12 75.9 105 33.3
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 8.8e-12 74.7 89 51.7
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 8.8e-12 74.7 89 51.7
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 4.3e-11 72.4 57 59.6
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 5.7e-11 72.0 70 55.7
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 4.8e-10 68.9 108 38.9
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 4.8e-10 68.9 82 46.3
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 7.7e-08 61.6 51 52.9
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.2e-07 60.1 71 46.5
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 2.9e-07 59.7 62 50.0
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 4.2e-06 55.8 51 56.9
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 7.2e-06 55.1 49 55.1


User provided reference genes

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