Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 2.9e-41 171.4 82 100.0
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 3.2e-40 167.9 82 98.8
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 3.4e-18 94.7 75 58.7
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 6.5e-17 90.5 80 61.2
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-16 89.0 75 57.3
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 4.2e-16 87.8 79 58.2
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 5.5e-16 87.4 80 60.0
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 7.1e-16 87.0 75 58.7
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 9.3e-16 86.7 75 54.7
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-15 85.5 75 57.3
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 2.7e-15 85.1 76 60.5
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 3.5e-15 84.7 76 59.2
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 4.6e-15 84.3 75 57.3
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 1.0e-14 83.2 48 72.9
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 1.0e-14 83.2 48 72.9
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 1.0e-14 83.2 75 56.0
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 1.3e-14 82.8 75 52.0
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-14 82.4 73 58.9
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.8e-14 82.4 75 56.0
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 1.8e-14 82.4 76 59.2
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 3.0e-14 81.6 75 54.7
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 3.0e-14 81.6 75 54.7
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 3.9e-14 81.3 79 54.4
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 3.9e-14 81.3 75 53.3
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 5.1e-14 80.9 79 58.2
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 5.1e-14 80.9 79 58.2
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 8.7e-14 80.1 72 54.2
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 8.7e-14 80.1 77 54.5
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 8.7e-14 80.1 77 54.5
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 8.7e-14 80.1 79 57.0
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-13 79.7 72 54.2
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 3.3e-13 78.2 67 58.2
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 4.3e-13 77.8 76 51.3
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 4.3e-13 77.8 72 52.8
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 4.3e-13 77.8 75 56.0
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 7.4e-13 77.0 72 52.8
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 9.6e-13 76.6 75 53.3
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 9.6e-13 76.6 79 55.7
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-12 76.3 77 54.5
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 1.3e-12 76.3 79 51.9
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 1.3e-12 76.3 79 51.9
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 2.1e-12 75.5 64 62.5
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 2.1e-12 75.5 64 62.5
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.7e-12 74.7 76 51.3
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 3.7e-12 74.7 75 54.7
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 4.8e-12 74.3 72 51.4
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 4.8e-12 74.3 71 52.1
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 6.2e-12 73.9 72 51.4
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 6.2e-12 73.9 47 68.1
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 8.2e-12 73.6 79 50.6
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 8.2e-12 73.6 79 54.4
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-11 73.2 76 50.0
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-11 73.2 55 61.8
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-11 72.8 76 48.7
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 2.4e-11 72.0 76 48.7
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 2.4e-11 72.0 47 68.1
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 4.0e-11 71.2 68 52.9
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 4.0e-11 71.2 76 52.6
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 5.3e-11 70.9 72 50.0
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 5.3e-11 70.9 71 49.3
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 6.9e-11 70.5 69 58.0
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 1.2e-10 69.7 51 62.7
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 2.6e-10 68.6 76 52.6
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 5.8e-10 67.4 45 62.2
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 2.2e-09 65.5 45 66.7
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 2.2e-09 65.5 45 66.7
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 5.0e-09 64.3 64 54.7
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 5.0e-09 64.3 64 54.7
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-08 61.6 63 49.2
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 5.5e-08 60.8 72 47.2
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 5.5e-08 60.8 59 59.3
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 7.1e-08 60.5 73 46.6
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 1.2e-07 59.7 42 66.7
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 4.6e-07 57.8 63 52.4
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 1.3e-06 56.2 75 45.3
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-06 55.8 73 45.2
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 1.8e-06 55.8 43 58.1
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 6.7e-06 53.9 60 48.3
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 8.7e-06 53.5 48 58.3


User provided reference genes

Program Settings