Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 3.2e-110 401.7 201 100.0
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 9.1e-97 357.1 306 65.7
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 4.2e-94 348.2 306 64.7
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 5.5e-94 347.8 306 64.4
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 1.5e-91 339.7 312 62.8
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 1.5e-91 339.7 312 62.8
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 8.2e-90 334.0 312 62.5
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 1.1e-89 333.6 312 62.5
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 4.1e-89 331.6 306 61.4
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 8.5e-79 297.4 280 61.4
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 2.8e-74 282.3 276 59.8
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 8.0e-53 211.1 312 45.8
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 4.4e-51 205.3 308 44.8
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 9.2e-49 197.6 120 82.5
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 4.6e-48 195.3 302 41.4
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 3.0e-47 192.6 303 41.3
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 3.9e-47 192.2 305 42.3
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 5.0e-47 191.8 296 41.2
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 2.5e-46 189.5 302 40.7
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 5.6e-46 188.3 154 61.0
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 7.3e-46 188.0 308 40.9
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.6e-45 186.8 308 40.3
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 6.8e-44 181.4 227 46.3
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 8.9e-44 181.0 297 39.7
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 1.5e-43 180.3 227 46.7
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 2.0e-43 179.9 300 39.3
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 4.4e-43 178.7 294 39.8
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.7e-42 176.8 120 70.8
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 1.4e-41 173.7 115 73.0
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.1e-40 169.9 128 65.6
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 3.0e-39 166.0 121 65.3
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 3.9e-39 165.6 150 55.3
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 2.5e-38 162.9 121 65.3
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 4.3e-38 162.2 121 65.3
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 7.3e-38 161.4 121 64.5
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 2.8e-37 159.5 121 63.6
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 2.8e-37 159.5 122 65.6
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 3.6e-37 159.1 121 63.6
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 3.6e-37 159.1 120 63.3
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 4.7e-37 158.7 120 64.2
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.1e-36 157.5 117 65.8
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 1.8e-36 156.8 121 63.6
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 1.8e-36 156.8 121 65.3
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.8e-36 156.8 121 62.8
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 2.3e-36 156.4 121 61.2
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 2.3e-36 156.4 121 61.2
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 2.3e-36 156.4 117 63.2
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 3.1e-36 156.0 121 61.2
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 3.1e-36 156.0 121 62.0
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 3.1e-36 156.0 163 50.9
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 4.0e-36 155.6 117 64.1
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 4.0e-36 155.6 120 66.7
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 5.2e-36 155.2 121 61.2
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 5.2e-36 155.2 117 66.7
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 5.2e-36 155.2 117 65.0
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 6.8e-36 154.8 121 61.2
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.2e-35 154.1 121 62.0
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 1.2e-35 154.1 117 64.1
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 1.2e-35 154.1 120 62.5
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 1.2e-35 154.1 120 62.5
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 1.5e-35 153.7 121 60.3
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 1.5e-35 153.7 120 61.7
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.0e-35 153.3 117 65.0
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 2.6e-35 152.9 119 61.3
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 3.4e-35 152.5 116 66.4
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 3.4e-35 152.5 120 60.0
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 3.4e-35 152.5 117 64.1
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 5.8e-35 151.8 120 60.0
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 5.8e-35 151.8 118 62.7
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 5.8e-35 151.8 117 63.2
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 9.9e-35 151.0 118 61.9
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 9.9e-35 151.0 121 58.7
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 9.9e-35 151.0 119 63.0
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 9.9e-35 151.0 117 62.4
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 9.9e-35 151.0 120 61.7
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.3e-34 150.6 121 58.7
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 1.3e-34 150.6 120 60.8
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 1.3e-34 150.6 117 62.4
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 1.3e-34 150.6 120 61.7
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 1.7e-34 150.2 120 61.7
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 1.7e-34 150.2 117 62.4
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 2.2e-34 149.8 117 63.2
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 2.9e-34 149.4 117 64.1
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 2.9e-34 149.4 120 60.0
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.9e-34 149.4 117 63.2
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 2.9e-34 149.4 117 62.4
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 2.9e-34 149.4 122 62.3
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 3.7e-34 149.1 121 59.5
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 3.7e-34 149.1 120 60.0
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 3.7e-34 149.1 117 61.5
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 4.9e-34 148.7 120 60.8
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 4.9e-34 148.7 120 63.3
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 6.4e-34 148.3 117 61.5
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 8.3e-34 147.9 117 61.5
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 8.3e-34 147.9 117 64.1
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 8.3e-34 147.9 117 61.5
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 1.1e-33 147.5 117 59.0
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 1.1e-33 147.5 120 62.5
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 1.4e-33 147.1 113 64.6
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 1.4e-33 147.1 120 59.2
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 2.4e-33 146.4 117 60.7
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 2.4e-33 146.4 117 60.7
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 2.4e-33 146.4 120 60.0
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 3.2e-33 146.0 163 52.1
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 4.1e-33 145.6 120 60.8
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 4.1e-33 145.6 117 59.8
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 5.4e-33 145.2 120 59.2
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 5.4e-33 145.2 125 60.0
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 5.4e-33 145.2 111 64.9
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 7.1e-33 144.8 147 50.3
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 7.1e-33 144.8 151 49.7
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 7.1e-33 144.8 117 59.8
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 7.1e-33 144.8 120 60.8
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 9.2e-33 144.4 117 59.0
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.2e-32 144.1 163 52.8
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 1.2e-32 144.1 132 56.8
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 2.1e-32 143.3 111 64.0
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 2.1e-32 143.3 120 60.0
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 2.1e-32 143.3 117 59.0
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 4.6e-32 142.1 120 55.8
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 4.6e-32 142.1 111 60.4
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 6.0e-32 141.7 138 55.1
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 1.0e-31 141.0 131 56.5
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 1.0e-31 141.0 119 58.0
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 1.0e-31 141.0 124 57.3
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 1.0e-31 141.0 141 51.1
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 3.0e-31 139.4 114 58.8
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.1e-30 137.5 120 56.7
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 1.9e-30 136.7 120 55.0
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 4.3e-30 135.6 120 57.5
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 9.5e-30 134.4 118 53.4
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 1.6e-29 133.7 120 55.0
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 1.8e-28 130.2 117 55.6
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 1.5e-27 127.1 117 53.8
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 2.0e-27 126.7 118 54.2
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 2.2e-26 123.2 149 44.3
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 4.9e-26 122.1 137 48.9
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 4.9e-26 122.1 117 52.1
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 6.4e-26 121.7 149 43.6
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 3.2e-25 119.4 117 48.7
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 9.6e-22 107.8 92 52.2
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 6.9e-20 101.7 85 61.2
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 2.2e-18 96.7 82 56.1
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.8e-18 95.9 78 61.5
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 9.3e-17 91.3 119 42.9
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 1.6e-16 90.5 117 41.0
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 7.8e-16 88.2 53 75.5
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 3.0e-15 86.3 54 72.2
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 3.9e-15 85.9 81 51.9
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 5.1e-15 85.5 53 73.6
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 2.5e-14 83.2 54 68.5
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 8.1e-13 78.2 91 42.9
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 8.1e-13 78.2 91 47.3
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 2.4e-12 76.6 115 40.0
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.2e-09 66.2 77 50.6
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 3.9e-07 59.3 166 31.3
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 5.1e-07 58.9 124 31.5
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 2.5e-06 56.6 50 50.0
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 7.4e-06 55.1 115 30.4


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