Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p39990 Brassica napus HOM05D024074 ORTHO05D024621 2.1e-26 121.7 65 100.0
C05p30520 Brassica napus HOM05D024074 ORTHO05D024621 1.9e-24 115.2 65 95.4
A01p28800 Brassica napus HOM05D024074 ORTHO05D024621 8.1e-23 109.8 65 92.3
BolC5t31787H Brassica oleracea HOM05D024074 ORTHO05D024621 1.4e-22 109.0 65 90.8
AT4G02230 Arabidopsis thaliana HOM05D001493 ORTHO05D001681 2.7e-10 68.2 60 68.3
BcaC04g24049 Brassica carinata HOM05D001493 ORTHO05D001681 6.1e-10 67.0 61 67.2
C09p01770 Brassica napus HOM05D001493 ORTHO05D001681 6.1e-10 67.0 61 67.2
Thhalv10028960m.g Eutrema salsugineum HOM05D001493 ORTHO05D001681 1.3e-09 65.9 60 66.7
BcaB01g02063 Brassica carinata HOM05D001493 ORTHO05D001681 1.8e-09 65.5 61 67.2
Carub.0006s3493 Capsella rubella HOM05D001493 ORTHO05D001681 1.8e-09 65.5 59 66.1
Sp6g02130 Schrenkiella parvula HOM05D001493 ORTHO05D001681 1.8e-09 65.5 60 65.0
AL6G50900 Arabidopsis lyrata HOM05D001493 ORTHO05D001681 3.9e-09 64.3 60 66.7
BolC9t53112H Brassica oleracea HOM05D001493 ORTHO05D001681 5.1e-09 63.9 61 65.6
CARHR250450 Cardamine hirsuta HOM05D001493 ORTHO05D001681 8.7e-09 63.2 60 63.3
Aa31LG5G1900 Aethionema arabicum HOM05D001493 ORTHO05D001681 2.5e-08 61.6 60 61.7
BcaC01g06768 Brassica carinata HOM05D001493 ORTHO05D001681 3.3e-08 61.2 56 64.3
A03p31150 Brassica napus HOM05D001493 ORTHO05D001681 3.3e-08 61.2 56 64.3
BolC3t16083H Brassica oleracea HOM05D001493 ORTHO05D001681 3.3e-08 61.2 56 64.3
BcaB01g02438 Brassica carinata HOM05D001493 ORTHO05D001681 7.4e-08 60.1 56 62.5
A09p01700 Brassica napus HOM05D001493 ORTHO05D001681 1.3e-07 59.3 62 64.5
BraA09t35825Z Brassica rapa HOM05D001493 ORTHO05D001681 1.3e-07 59.3 62 64.5
A08p37580 Brassica napus HOM05D001493 ORTHO05D001681 2.8e-07 58.2 60 61.7
Duzib133G0698 Durio zibethinus HOM05D001493 ORTHO05D001681 4.8e-07 57.4 44 72.7
Gohir.A11G113000 Gossypium hirsutum HOM05D001493 ORTHO05D001681 8.2e-07 56.6 48 68.8
Gohir.D11G118000 Gossypium hirsutum HOM05D001493 ORTHO05D001681 8.2e-07 56.6 48 68.8
Gorai.007G126400 Gossypium raimondii HOM05D001493 ORTHO05D001681 8.2e-07 56.6 48 68.8
BraA10t42421Z Brassica rapa HOM05D001493 ORTHO05D001681 1.4e-06 55.8 61 59.0
Carub.0001s0187 Capsella rubella HOM05D001493 ORTHO05D001681 1.8e-06 55.5 66 59.1
Thhalv10008661m.g Eutrema salsugineum HOM05D001493 ORTHO05D001681 1.8e-06 55.5 61 59.0
THA.LOC104802183 Tarenaya hassleriana HOM05D001493 ORTHO05D001681 4.1e-06 54.3 59 59.3
Aqoxy293s001 Aquilegia oxysepala HOM05D001493 ORTHO05D013936 5.3e-06 53.9 58 62.1
BcaC07g42406 Brassica carinata HOM05D001493 ORTHO05D001681 5.3e-06 53.9 60 56.7
BolC8t52830H Brassica oleracea HOM05D001493 ORTHO05D001681 5.3e-06 53.9 60 56.7
BcaB03g13503 Brassica carinata HOM05D001493 ORTHO05D001681 6.9e-06 53.5 59 61.0
C05p01420 Brassica napus HOM05D001493 ORTHO05D001681 6.9e-06 53.5 57 59.6
CiPaw.07G112300 Carya illinoinensis HOM05D001493 ORTHO05D001681 9.0e-06 53.1 59 61.0
TPR.G9602 Trifolium pratense HOM05D001493 ORTHO05D001681 9.0e-06 53.1 55 60.0


User provided reference genes

Program Settings