Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 0.0e+00 1149.4 617 100.0
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 0.0e+00 1127.9 619 98.2
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 0.0e+00 1126.7 620 97.7
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 0.0e+00 1099.7 620 95.3
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 0.0e+00 1099.7 621 96.3
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 0.0e+00 1098.2 620 96.1
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 5.1e-300 1033.9 622 90.4
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 5.1e-292 1007.3 626 86.9
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 9.4e-286 986.5 622 87.8
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 7.9e-285 983.4 622 88.3
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 2.5e-283 978.4 622 87.8
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 3.8e-279 964.5 627 86.3
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 3.8e-263 911.4 614 79.6
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 2.9e-234 815.5 625 73.6
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 4.3e-206 721.8 617 65.3
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 3.4e-195 685.6 540 68.5
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 3.0e-191 672.5 639 60.3
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 9.6e-190 667.5 643 61.9
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 4.8e-189 665.2 546 67.6
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 6.9e-188 661.4 563 65.9
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.6e-187 659.4 546 67.0
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.2e-186 656.4 618 61.8
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 8.4e-186 654.4 627 62.8
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 8.4e-186 654.4 639 61.3
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 2.5e-185 652.9 573 63.4
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.6e-184 650.2 561 64.3
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.8e-183 646.7 536 66.6
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.1e-182 644.0 661 58.1
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 5.7e-182 641.7 642 60.3
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 3.1e-180 636.0 625 59.8
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 2.6e-179 632.9 571 62.3
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 3.4e-179 632.5 572 61.5
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.7e-178 630.2 542 64.9
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 2.9e-178 629.4 638 58.5
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 9.3e-177 624.4 542 64.4
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 2.1e-176 623.2 530 63.6
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 3.9e-175 619.0 601 59.7
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 2.5e-174 616.3 564 61.2
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 4.3e-174 615.5 542 64.2
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 3.7e-173 612.5 567 60.7
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.1e-172 609.0 562 60.9
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 5.3e-172 608.6 622 57.6
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 6.9e-172 608.2 622 58.2
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 6.9e-172 608.2 617 58.2
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 1.5e-171 607.1 572 59.4
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 5.9e-171 605.1 538 62.3
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 5.9e-171 605.1 632 56.8
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 7.7e-171 604.7 525 61.9
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.7e-170 603.6 625 57.9
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.7e-170 603.6 625 56.5
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 2.2e-170 603.2 572 60.0
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.9e-170 602.8 564 61.3
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 3.8e-170 602.4 572 59.3
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.8e-170 602.4 631 57.1
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.9e-169 600.1 549 61.0
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 3.2e-169 599.4 567 59.1
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 5.5e-169 598.6 543 61.3
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.6e-168 597.0 567 60.0
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 2.1e-168 596.7 599 55.9
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 3.6e-168 595.9 640 56.9
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 1.8e-167 593.6 548 60.9
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 6.7e-167 591.7 551 59.0
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.0e-166 590.1 536 62.3
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.3e-165 587.4 528 62.1
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 4.8e-165 585.5 624 57.4
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 6.3e-165 585.1 564 59.8
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 5.9e-163 578.6 570 58.8
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.3e-162 577.4 617 55.6
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.7e-162 577.0 640 54.5
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 2.9e-162 576.2 556 59.7
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 2.5e-161 573.2 544 59.2
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 7.2e-161 571.6 557 59.1
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 4.4e-158 562.4 568 57.2
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.8e-156 557.0 541 57.3
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 5.3e-156 555.4 545 58.9
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.2e-155 554.3 647 54.4
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 7.2e-153 545.0 547 58.7
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 2.2e-146 523.5 546 54.9
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 6.3e-141 505.4 576 53.0
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.4e-140 504.2 466 60.3
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.1e-137 494.6 482 61.0
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.8e-135 487.3 490 59.2
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.5e-129 466.8 466 58.2
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 5.7e-126 455.7 536 51.1
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 2.3e-119 433.7 472 57.6
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 4.3e-113 412.9 541 45.3
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.9e-109 399.4 579 44.4
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.4e-103 381.3 372 60.5
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 6.8e-103 379.0 459 53.6
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 7.1e-100 369.0 380 59.7
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 9.2e-100 368.6 323 65.6
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.7e-99 367.1 316 61.7
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 8.6e-98 362.1 379 58.8
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 1.5e-94 351.3 471 49.7
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 3.3e-81 307.0 375 51.2
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.6e-81 306.2 447 44.7
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 4.9e-69 266.5 565 35.6
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.6e-56 224.9 248 55.2
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.5e-54 218.4 167 70.7
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 2.2e-48 198.0 527 32.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 7.2e-36 156.4 133 61.7
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.7e-35 154.5 115 66.1
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.4e-33 147.1 97 72.2
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.0e-30 138.3 136 55.1
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.7e-29 135.2 99 67.7
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 2.5e-28 131.3 95 69.5
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 2.0e-25 121.7 162 43.2
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 7.5e-25 119.8 349 27.5
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.0e-17 95.1 118 50.8
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.4e-17 94.0 59 74.6
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 9.2e-15 86.3 123 48.8
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 2.3e-13 81.6 87 52.9
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 5.0e-13 80.5 191 31.4


User provided reference genes

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