Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p37390 Brassica napus HOM05D012012 ORTHO05D013530 1.1e-45 186.4 103 100.0
BolC6t38841H Brassica oleracea HOM05D012012 ORTHO05D013530 3.2e-45 184.9 103 98.1
BcaC08g45940 Brassica carinata HOM05D012012 ORTHO05D013530 3.9e-43 177.9 98 99.0
BraA07t30811Z Brassica rapa HOM05D012012 ORTHO05D013530 1.1e-37 159.8 103 81.6
A07p31830 Brassica napus HOM05D012012 ORTHO05D013530 6.6e-35 150.6 103 80.6
BcaC08g45942 Brassica carinata HOM05D012012 ORTHO05D013530 4.1e-29 131.3 104 69.2
C06p37370 Brassica napus HOM05D012012 ORTHO05D013530 4.1e-29 131.3 104 69.2
BolC6t38839H Brassica oleracea HOM05D012012 ORTHO05D013530 6.0e-28 127.5 104 68.3
BcaNung06173 Brassica carinata HOM05D012012 ORTHO05D013530 2.6e-23 112.1 91 64.8
A07p31820 Brassica napus HOM05D012012 ORTHO05D013530 8.4e-22 107.1 85 65.9
BraA07t30809Z Brassica rapa HOM05D012012 ORTHO05D013530 8.4e-22 107.1 85 65.9
BraA03t11947Z Brassica rapa HOM05D012012 ORTHO05D013530 5.4e-21 104.4 88 62.5
Sp4g00800 Schrenkiella parvula HOM05D003095 ORTHO05D003517 5.6e-18 94.4 94 58.5
Thhalv10000397m.g Eutrema salsugineum HOM05D003095 ORTHO05D003517 2.1e-12 75.9 61 62.3
BcaB08g34990 Brassica carinata HOM05D003095 ORTHO05D003517 3.5e-12 75.1 48 66.7
AT2G21640 Arabidopsis thaliana HOM05D003095 ORTHO05D003517 6.0e-12 74.3 102 39.2
C03p32890 Brassica napus HOM05D012012 ORTHO05D013530 1.7e-11 72.8 47 72.3
C08p41320 Brassica napus HOM05D003095 ORTHO05D003517 2.3e-11 72.4 45 66.7
A09p58070 Brassica napus HOM05D003095 ORTHO05D003517 3.0e-11 72.0 56 60.7
BraA09t41195Z Brassica rapa HOM05D003095 ORTHO05D003517 3.0e-11 72.0 56 60.7
AL4G10840 Arabidopsis lyrata HOM05D003095 ORTHO05D003517 3.9e-11 71.6 102 40.2
BcaC07g41130 Brassica carinata HOM05D001159 ORTHO05D001712 6.6e-11 70.9 55 60.0
BolC8t51695H Brassica oleracea HOM05D001159 ORTHO05D001712 6.6e-11 70.9 55 60.0
Carub.0004s0067 Capsella rubella HOM05D003095 ORTHO05D003517 4.3e-10 68.2 57 52.6
CARHR112630 Cardamine hirsuta HOM05D003095 ORTHO05D003517 3.1e-08 62.0 89 36.0
Aqoxy5G01623 Aquilegia oxysepala HOM05D003095 ORTHO05D003517 6.4e-06 54.3 53 50.9
CSS0033942 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 6.4e-06 54.3 106 36.8
Glyma.02G157900 Glycine max HOM05D003095 ORTHO05D003517 6.4e-06 54.3 103 35.9
MD10G1075100 Malus domestica HOM05D003095 ORTHO05D003517 6.4e-06 54.3 44 59.1
PSO700G0195 Papaver somniferum HOM05D003095 ORTHO05D003517 6.4e-06 54.3 45 55.6
Lalb_Chr25g0280921 Lupinus albus HOM05D003095 ORTHO05D003517 8.4e-06 53.9 98 35.7
Phvul.007G250700 Phaseolus vulgaris HOM05D003095 ORTHO05D003517 8.4e-06 53.9 101 33.7


User provided reference genes

Program Settings