Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 9.5e-195 683.3 347 100.0
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 9.5e-195 683.3 347 100.0
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 9.2e-182 640.2 344 94.8
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 4.3e-179 631.3 344 94.2
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 3.4e-152 542.0 344 84.3
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 2.2e-146 522.7 307 88.3
BcaC08g44779 Brassica carinata HOM05D008872 ORTHO05D032631 3.6e-101 372.5 342 61.7
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 4.0e-100 369.0 230 84.8
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 1.7e-95 353.6 185 94.1
C06p23490 Brassica napus HOM05D008872 ORTHO05D032631 2.6e-91 339.7 342 58.5
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 1.0e-87 327.8 345 58.8
BolC7t44799H Brassica oleracea HOM05D008872 ORTHO05D011322 4.3e-70 269.2 139 93.5
BolC6t37523H Brassica oleracea HOM05D008872 ORTHO05D032631 1.4e-68 264.2 246 62.2
BolC3t20471H Brassica oleracea HOM05D008872 ORTHO05D011322 6.8e-68 261.9 139 92.1
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 4.9e-66 255.8 150 92.7
BolC2t10737H Brassica oleracea HOM05D008872 ORTHO05D105753 3.2e-49 199.9 98 95.9
C06p02220 Brassica napus HOM05D008872 ORTHO05D011322 9.6e-46 188.3 117 89.7
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 1.0e-39 168.3 356 39.0
C09p54500 Brassica napus HOM05D008872 ORTHO05D097415 1.8e-36 157.5 142 56.3
A05p10860 Brassica napus HOM05D021045 ORTHO05D027803 7.2e-25 119.0 256 36.7
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 9.4e-25 118.6 71 93.0
BraA05t20031Z Brassica rapa HOM05D021045 ORTHO05D027803 2.7e-24 117.1 256 36.3
C08p22310 Brassica napus HOM05D009579 ORTHO05D019922 3.0e-23 113.6 244 36.5
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 2.4e-20 104.0 239 34.3
A10p00120 Brassica napus HOM05D000174 ORTHO05D027648 1.1e-17 95.1 148 39.9
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 1.4e-17 94.7 236 33.1
C06p48220 Brassica napus HOM05D063514 ORTHO05D103609 2.5e-17 94.0 269 31.6
BraA10t42291Z Brassica rapa HOM05D000174 ORTHO05D027648 4.7e-16 89.7 150 38.7
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 5.1e-15 86.3 280 33.2
C05p17100 Brassica napus HOM05D008872 ORTHO05D103501 5.1e-15 86.3 60 76.7
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 1.7e-10 71.2 254 29.5
C09p54490 Brassica napus HOM05D008872 ORTHO05D011322 2.9e-10 70.5 95 55.8
C07p53080 Brassica napus HOM05D013189 ORTHO05D032411 6.5e-10 69.3 327 27.2
A04p33340 Brassica napus HOM05D000073 ORTHO05D000033 1.1e-09 68.6 197 31.5
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 1.1e-09 68.6 254 29.1
BcaC06g36557 Brassica carinata HOM05D008872 ORTHO05D091203 4.2e-09 66.6 59 62.7
BcaC06g34166 Brassica carinata HOM05D008872 ORTHO05D039385 7.2e-09 65.9 68 57.4
C07p31980 Brassica napus HOM05D008872 ORTHO05D039385 7.2e-09 65.9 68 57.4
BcaNung03192 Brassica carinata HOM05D013189 ORTHO05D032411 1.2e-08 65.1 280 27.5
BolC3t19888H Brassica oleracea HOM05D021045 ORTHO05D011322 1.6e-08 64.7 138 32.6
BcaC05g29762 Brassica carinata HOM05D009579 ORTHO05D092626 6.1e-08 62.8 159 37.7
C03p76320 Brassica napus HOM05D008872 ORTHO05D011322 1.4e-07 61.6 159 30.2
BcaC01g05406 Brassica carinata HOM05D008872 ORTHO05D011322 5.2e-07 59.7 67 56.7
BcaB01g04332 Brassica carinata HOM05D034884 ORTHO05D092501 6.7e-07 59.3 68 51.5
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 2.6e-06 57.4 66 53.0
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 5.7e-06 56.2 66 51.5
A08p33950 Brassica napus HOM05D015039 ORTHO05D011322 7.5e-06 55.8 66 51.5


User provided reference genes

Program Settings