Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p37300 Brassica napus HOM05D004326 ORTHO05D004570 1.4e-19 98.6 47 100.0
AL2G27790 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 4.0e-19 97.1 47 97.9
AT1G68825 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 4.0e-19 97.1 47 97.9
Carub.0002s1541 Capsella rubella HOM05D004326 ORTHO05D004570 9.7e-18 92.4 47 89.4
THA.LOC109117025 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.4e-16 87.8 47 83.0
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 3.1e-16 87.4 47 83.0
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 7.2e-13 76.3 47 70.2
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.2e-13 76.3 47 74.5
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 7.2e-13 76.3 47 74.5
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 7.2e-13 76.3 47 74.5
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 1.2e-12 75.5 45 73.3
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 1.2e-12 75.5 47 72.3
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 2.1e-12 74.7 47 72.3
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 2.1e-12 74.7 46 67.4
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.7e-12 74.3 47 72.3
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 2.7e-12 74.3 47 70.2
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 3.6e-12 73.9 47 70.2
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 3.6e-12 73.9 44 72.7
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 6.1e-12 73.2 47 68.1
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 8.0e-12 72.8 48 75.0
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 1.0e-11 72.4 45 68.9
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 1.0e-11 72.4 47 68.1
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 1.0e-11 72.4 47 68.1
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 1.8e-11 71.6 47 66.0
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 2.3e-11 71.2 45 68.9
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 3.0e-11 70.9 45 66.7
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 3.0e-11 70.9 48 70.8
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 3.0e-11 70.9 49 75.5
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 4.0e-11 70.5 47 66.0
BcaB03g15854 Brassica carinata HOM05D004326 ORTHO05D004570 5.2e-11 70.1 38 92.1
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 6.8e-11 69.7 47 70.2
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 8.8e-11 69.3 44 68.2
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 1.2e-10 68.9 41 75.6
Thhalv10019420m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 1.5e-10 68.6 36 91.7
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 2.0e-10 68.2 48 68.8
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 2.0e-10 68.2 48 68.8
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 2.0e-10 68.2 42 73.8
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 2.0e-10 68.2 42 73.8
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.0e-10 68.2 47 63.8
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 3.4e-10 67.4 40 72.5
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 3.4e-10 67.4 40 72.5
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 3.4e-10 67.4 44 68.2
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 3.4e-10 67.4 44 68.2
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 3.4e-10 67.4 44 68.2
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 3.4e-10 67.4 48 66.7
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 3.4e-10 67.4 49 65.3
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 5.7e-10 66.6 47 63.8
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 5.7e-10 66.6 47 61.7
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 5.7e-10 66.6 47 61.7
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 5.7e-10 66.6 47 68.1
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 9.8e-10 65.9 40 72.5
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 9.8e-10 65.9 40 72.5
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 9.8e-10 65.9 40 72.5
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 9.8e-10 65.9 45 73.3
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 9.8e-10 65.9 48 62.5
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 1.3e-09 65.5 46 65.2
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 1.7e-09 65.1 44 65.9
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 1.7e-09 65.1 40 72.5
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 1.7e-09 65.1 45 66.7
Manes.02G066501 Manihot esculenta HOM05D004326 ORTHO05D004570 2.2e-09 64.7 47 61.7
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 3.7e-09 63.9 47 63.8
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 3.7e-09 63.9 47 63.8
ClCG03G009910 Citrullus lanatus HOM05D004326 ORTHO05D004570 8.3e-09 62.8 31 90.3
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 1.1e-08 62.4 46 60.9
TWI12G0968 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.1e-08 62.4 47 61.7
Gohir.A09G046900 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.8e-08 61.6 49 59.2
Gohir.D09G047400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.8e-08 61.6 49 59.2
Gorai.006G062700 Gossypium raimondii HOM05D004326 ORTHO05D004570 1.8e-08 61.6 49 59.2
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 1.8e-08 61.6 41 63.4
CiPaw.15G127400 Carya illinoinensis HOM05D004326 ORTHO05D004570 2.4e-08 61.2 47 51.1
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 2.4e-08 61.2 47 57.4
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 3.1e-08 60.8 41 65.9
Potri.017G112100 Populus trichocarpa HOM05D004326 ORTHO05D004570 3.1e-08 60.8 44 59.1
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 4.1e-08 60.5 41 65.9
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 4.1e-08 60.5 49 59.2
TWI56G0546 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 4.1e-08 60.5 47 59.6
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 57.8
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 5.4e-08 60.1 50 62.0
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 57.8
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 57.8
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 5.4e-08 60.1 45 57.8
AT3G25717 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 7.0e-08 59.7 36 75.0
A09p24960 Brassica napus HOM05D004326 ORTHO05D004570 7.0e-08 59.7 36 75.0
BraA09t38084Z Brassica rapa HOM05D004326 ORTHO05D004570 7.0e-08 59.7 36 75.0
Carub.0005s0354 Capsella rubella HOM05D004326 ORTHO05D004570 7.0e-08 59.7 36 75.0
Potri.004G102950 Populus trichocarpa HOM05D004326 ORTHO05D004570 7.0e-08 59.7 37 70.3
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 9.1e-08 59.3 37 70.3
Duzib084G0446 Durio zibethinus HOM05D004326 ORTHO05D004570 1.6e-07 58.5 50 58.0
Glyma.12G187300 Glycine max HOM05D004326 ORTHO05D004570 1.6e-07 58.5 42 64.3
A06p42560 Brassica napus HOM05D004326 ORTHO05D004570 2.0e-07 58.2 31 80.6
BraA06t27171Z Brassica rapa HOM05D004326 ORTHO05D004570 2.0e-07 58.2 31 80.6
Migut.L01097 Erythranthe guttata HOM05D004326 ORTHO05D004570 2.7e-07 57.8 34 76.5
PGSC0003DMG400007475 Solanum tuberosum HOM05D004326 ORTHO05D004570 2.7e-07 57.8 31 83.9
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 3.5e-07 57.4 36 69.4
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 3.5e-07 57.4 36 69.4
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 3.5e-07 57.4 36 69.4
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 3.5e-07 57.4 43 62.8
THA.LOC109117071 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 3.5e-07 57.4 43 60.5
Duzib068G0156 Durio zibethinus HOM05D004326 ORTHO05D004570 4.5e-07 57.0 47 53.2
Carub.0002s1354 Capsella rubella HOM05D004326 ORTHO05D004570 5.9e-07 56.6 39 66.7
Lalb_Chr17g0336511 Lupinus albus HOM05D004326 ORTHO05D004570 5.9e-07 56.6 37 64.9
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 7.7e-07 56.2 48 58.3
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 1.0e-06 55.8 51 58.8
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 1.0e-06 55.8 48 56.2
AT1G67265 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.3e-06 55.5 39 64.1
Duzib084G0016 Durio zibethinus HOM05D004326 ORTHO05D004570 1.3e-06 55.5 50 56.0
RcHm_v2.0_Chr2g0163211 Rosa chinensis HOM05D004326 ORTHO05D004570 1.3e-06 55.5 45 57.8
PSO063G2252 Papaver somniferum HOM05D004326 ORTHO05D004570 1.7e-06 55.1 31 77.4
Os01g0525350 Oryza sativa ssp. japonica HOM05D026996 ORTHO05D004570 2.2e-06 54.7 29 82.8
PGR042G3431 Punica granatum HOM05D004326 ORTHO05D004570 2.2e-06 54.7 34 70.6
Thhalv10015386m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 2.9e-06 54.3 36 63.9
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 2.9e-06 54.3 30 76.7
THA.LOC109116985 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.9e-06 54.3 36 63.9
TWI81G0420 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 2.9e-06 54.3 48 56.2
Carub.0006s1421 Capsella rubella HOM05D004326 ORTHO05D004570 3.8e-06 53.9 36 63.9
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 3.8e-06 53.9 37 59.5
A10p23030 Brassica napus HOM05D004326 ORTHO05D004570 5.0e-06 53.5 36 63.9
BolC9t58947H Brassica oleracea HOM05D004326 ORTHO05D004570 5.0e-06 53.5 36 63.9
BraA10t44372Z Brassica rapa HOM05D004326 ORTHO05D004570 5.0e-06 53.5 36 63.9
Prupe.5G217900 Prunus persica HOM05D004326 ORTHO05D004570 5.0e-06 53.5 47 48.9
TWI60G1416 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 5.0e-06 53.5 48 56.2
BolC7t43991H Brassica oleracea HOM05D004326 ORTHO05D004570 6.5e-06 53.1 31 74.2
C03p08740 Brassica napus HOM05D004326 ORTHO05D004570 8.5e-06 52.8 36 61.1
BolC3t13372H Brassica oleracea HOM05D004326 ORTHO05D004570 8.5e-06 52.8 36 61.1
Glyma.02G099000 Glycine max HOM05D004326 ORTHO05D004570 8.5e-06 52.8 36 63.9


User provided reference genes

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