Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p37290 Brassica napus HOM05D000732 ORTHO05D001037 2.0e-23 111.7 61 100.0
A10p07180 Brassica napus HOM05D000732 ORTHO05D001037 2.5e-18 94.7 62 88.7
BcaC08g45933 Brassica carinata HOM05D000732 ORTHO05D001037 2.1e-12 75.1 39 100.0
BcaC08g45932 Brassica carinata HOM05D000732 ORTHO05D001037 6.1e-12 73.6 39 97.4
BcaC02g10480 Brassica carinata HOM05D000732 ORTHO05D001037 1.0e-11 72.8 39 97.4
A10p08330 Brassica napus HOM05D000732 ORTHO05D001037 1.4e-11 72.4 130 43.8
BraSC37t46170Z Brassica rapa HOM05D000732 ORTHO05D001037 1.4e-11 72.4 130 43.8
BolC2t12166H Brassica oleracea HOM05D000732 ORTHO05D001037 2.3e-11 71.6 70 67.1
BolC2t07695H Brassica oleracea HOM05D000732 ORTHO05D001037 5.1e-11 70.5 130 43.1
A05p19080 Brassica napus HOM05D000732 ORTHO05D001037 1.5e-10 68.9 39 92.3
BraA02t06951Z Brassica rapa HOM05D000732 ORTHO05D016836 1.5e-10 68.9 39 92.3
AL1G19190 Arabidopsis lyrata HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
BcaNung06266 Brassica carinata HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
BolC5t29442H Brassica oleracea HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
BraA09t41920Z Brassica rapa HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
Carub.0001s0810 Capsella rubella HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
Duzib268G0812 Durio zibethinus HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
Thhalv10006887m.g Eutrema salsugineum HOM05D000732 ORTHO05D001037 2.2e-09 65.1 42 88.1
Atru.chr4.1267 Acer truncatum HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
AT1G08760 Arabidopsis thaliana HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
arahy.Tifrunner.gnm1.ann1.F7AVJ6 Arachis hypogaea HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
BcaC07g41927 Brassica carinata HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
BraA01t02536Z Brassica rapa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 38 92.1
BraA06t23776Z Brassica rapa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
CANSAT78G1705 Cannabis sativa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Ciclev10018994m.g Citrus clementina HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Duzib151G0684 Durio zibethinus HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
FvH4_1g23460 Fragaria vesca HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
FAN19G1687 Fragaria x ananassa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
FAN23G1643 Fragaria x ananassa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
FAN26G2746 Fragaria x ananassa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
FAN28G0453 Fragaria x ananassa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Glyma.11G126000 Glycine max HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Glyma.12G050600 Glycine max HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Gohir.A10G140000 Gossypium hirsutum HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Gohir.D02G011900 Gossypium hirsutum HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Gohir.D10G126800 Gossypium hirsutum HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Gorai.005G015300 Gossypium raimondii HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Gorai.011G139700 Gossypium raimondii HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Lsat_1_v5_gn_5_71201 Lactuca sativa HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Lj3g0012404 Lotus japonicus HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
MD13G1256500 Malus domestica HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Prupe.1G198600 Prunus persica HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
PGR083G2190 Punica granatum HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
RcHm_v2.0_Chr2g0118831 Rosa chinensis HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Sabra07G0106800 Salix brachista HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Sabra07G0118700 Salix brachista HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Sp1g07400 Schrenkiella parvula HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
THA.LOC104805816 Tarenaya hassleriana HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
Thecc.04G174200 Theobroma cacao HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
TWI15G0939 Tripterygium wilfordii HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
unitig_578.g16256 Utricularia gibba HOM05D000732 ORTHO05D001037 2.8e-09 64.7 42 85.7
CARHR008680 Cardamine hirsuta HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 85.7
Cfa015199 Carpinus fangiana HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
CiPaw.01G095800 Carya illinoinensis HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
COL.COLO4_08221 Corchorus olitorius HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
Haze_01450 Corylus avellana HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
Manes.11G125500 Manihot esculenta HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
QL10p051216 Quercus lobata HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
unitig_18.g30054 Utricularia gibba HOM05D000732 ORTHO05D001037 3.7e-09 64.3 42 83.3
Cpa.g.sc9.321 Carica papaya HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
ClCG06G000970 Citrullus lanatus HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
MELO3C022442.2 Cucumis melo HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
CsaV3_6G006820 Cucumis sativus L. HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
Gohir.A02G011100 Gossypium hirsutum HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
Lalb_Chr22g0352061 Lupinus albus HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
MD04G1045400 Malus domestica HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
Sed0000679 Sechium edule HOM05D000732 ORTHO05D001037 6.3e-09 63.5 42 83.3
Aa31LG2G18700 Aethionema arabicum HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
BolC8t52511H Brassica oleracea HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Ca_01248_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Eucgr.H00341 Eucalyptus grandis HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Lj3g0019803 Lotus japonicus HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Manes.04G047100 Manihot esculenta HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Psat5g290360 Pisum sativum HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Sabra17G0000900 Salix brachista HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
Sabra17G0016000 Salix brachista HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
THA.LOC104821115 Tarenaya hassleriana HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
TPR.G6594 Trifolium pratense HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
TWI38G1157 Tripterygium wilfordii HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
VMungo1080G0037 Vigna mungo HOM05D000732 ORTHO05D001037 8.2e-09 63.2 42 83.3
arahy.Tifrunner.gnm1.ann1.3BRQ4W Arachis hypogaea HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 81.0
arahy.Tifrunner.gnm1.ann1.89WMF4 Arachis hypogaea HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 81.0
CSS0021096 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 85.7
CSS0031933 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 85.7
Ca_20803_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 81.0
MBI07_g18521_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 83.3
Medtr4g068050 Medicago truncatula HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 81.0
Oeu034443.3 Olea europaea HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 83.3
Phvul.011G052900 Phaseolus vulgaris HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 83.3
Psat7g209400 Pisum sativum HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 81.0
Potri.007G131600 Populus trichocarpa HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 83.3
Potri.017G026200 Populus trichocarpa HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 83.3
VMungo1127G0028 Vigna mungo HOM05D000732 ORTHO05D001037 1.1e-08 62.8 42 83.3
MSTRG.22011 Avicennia marina HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
BcaC03g18055 Brassica carinata HOM05D000732 ORTHO05D001037 1.4e-08 62.4 119 42.9
CAN.G65.154 Capsicum annuum HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Nn7g37579 Nelumbo nucifera HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Nitab4.5_0001586g0200 Nicotiana tabacum HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Nitab4.5_0002722g0020 Nicotiana tabacum HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Sc13g0006710 Simmondsia chinensis HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Solyc06g073110.3 Solanum lycopersicum HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Sopen06g029460 Solanum pennellii HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
TAR362G0289 Trochodendron aralioides HOM05D000732 ORTHO05D001037 1.4e-08 62.4 42 83.3
Ah.13g073720 Amaranthus hybridus HOM05D000732 ORTHO05D001037 1.8e-08 62.0 42 81.0
BcaB03g16369 Brassica carinata HOM05D000732 ORTHO05D001037 1.8e-08 62.0 42 85.7
Cfa019531 Carpinus fangiana HOM05D000732 ORTHO05D001037 1.8e-08 62.0 60 65.0
AUR62002353 Chenopodium quinoa HOM05D000732 ORTHO05D001037 1.8e-08 62.0 42 81.0
AUR62023831 Chenopodium quinoa HOM05D000732 ORTHO05D001037 1.8e-08 62.0 42 81.0
Haze_08206 Corylus avellana HOM05D000732 ORTHO05D001037 1.8e-08 62.0 42 81.0
PSO675G8077 Papaver somniferum HOM05D000732 ORTHO05D001037 1.8e-08 62.0 43 81.4
Hund12403 Selenicereus undatus HOM05D000732 ORTHO05D001037 1.8e-08 62.0 42 81.0
MSTRG.24573 Avicennia marina HOM05D000732 ORTHO05D001037 2.4e-08 61.6 42 83.3
EL10Ac3g06015 Beta vulgaris HOM05D000732 ORTHO05D001037 2.4e-08 61.6 42 78.6
Os09g0516700 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D001037 2.4e-08 61.6 43 79.1
TPR.G34245 Trifolium pratense HOM05D000732 ORTHO05D001037 2.4e-08 61.6 42 78.6
Zm00001eb318630 Zea mays HOM05D000732 ORTHO05D001037 2.4e-08 61.6 43 79.1
Os08g0541500 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D001037 3.1e-08 61.2 43 79.1
Zm00001eb037300 Zea mays HOM05D000732 ORTHO05D001037 3.1e-08 61.2 43 79.1
ATR0743G126 Amborella trichopoda HOM05D000732 ORTHO05D001037 4.1e-08 60.8 42 81.0
BcaB03g13315 Brassica carinata HOM05D000732 ORTHO05D001037 4.1e-08 60.8 42 85.7
CiPaw.02G051800 Carya illinoinensis HOM05D000732 ORTHO05D001037 4.1e-08 60.8 42 78.6
Migut.N03096 Erythranthe guttata HOM05D000732 ORTHO05D001037 4.1e-08 60.8 42 81.0
HanXRQChr12g0380281 Helianthus annuus HOM05D000732 ORTHO05D001037 4.1e-08 60.8 42 81.0
Dinv05084 Davidia involucrata HOM05D000732 ORTHO05D001037 5.3e-08 60.5 42 83.3
Glyma.15G028800 Glycine max HOM05D000732 ORTHO05D001037 5.3e-08 60.5 41 82.9
Medtr2g099095 Medicago truncatula HOM05D000732 ORTHO05D001037 5.3e-08 60.5 41 82.9
PSO017G4930 Papaver somniferum HOM05D000732 ORTHO05D001037 5.3e-08 60.5 43 79.1
HanXRQChr15g0469171 Helianthus annuus HOM05D000732 ORTHO05D001037 6.9e-08 60.1 42 81.0
Hma1.2p1_0324F.1_g125630 Hydrangea macrophylla HOM05D000732 ORTHO05D001037 6.9e-08 60.1 42 81.0
Lj6C108T8 Lonicera japonica HOM05D000732 ORTHO05D001037 6.9e-08 60.1 42 78.6
Peaxi162Scf00180g00312 Petunia axillaris HOM05D000732 ORTHO05D001037 6.9e-08 60.1 42 81.0
GSVIVG01010850001 Vitis vinifera HOM05D000732 ORTHO05D001037 6.9e-08 60.1 42 81.0
Actinidia27087 Actinidia chinensis HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 83.3
Actinidia34579 Actinidia chinensis HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 83.3
Aqoxy2G04130 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 78.6
Dinv44159 Davidia involucrata HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 83.3
Lj3A42T21 Lonicera japonica HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 78.6
Lj3C50T6 Lonicera japonica HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 78.6
Lalb_Chr24g0396741 Lupinus albus HOM05D000732 ORTHO05D001037 9.1e-08 59.7 43 76.7
SalBow6G2995 Salvia bowleyana HOM05D000732 ORTHO05D001037 9.1e-08 59.7 41 82.9
TAR626G1308 Trochodendron aralioides HOM05D000732 ORTHO05D001037 9.1e-08 59.7 42 78.6
CDE02G0077 Ceratophyllum demersum HOM05D000732 ORTHO05D001037 1.5e-07 58.9 42 76.2
CDE09G0408 Ceratophyllum demersum HOM05D000732 ORTHO05D001037 1.5e-07 58.9 42 76.2
Glyma.13G345500 Glycine max HOM05D000732 ORTHO05D001037 1.5e-07 58.9 41 80.5
Hund03179 Selenicereus undatus HOM05D000732 ORTHO05D001037 1.5e-07 58.9 42 73.8
Lalb_Chr03g0026011 Lupinus albus HOM05D000732 ORTHO05D001037 2.0e-07 58.5 41 80.5
DCAR_028427 Daucus carota HOM05D000732 ORTHO05D001037 2.6e-07 58.2 42 76.2
ECA233G5137 Erigeron canadensis HOM05D000732 ORTHO05D001037 2.6e-07 58.2 41 80.5
Lsat_1_v5_gn_3_109761 Lactuca sativa HOM05D000732 ORTHO05D001037 2.6e-07 58.2 42 73.8
Lalb_Chr14g0372531 Lupinus albus HOM05D000732 ORTHO05D001037 2.6e-07 58.2 42 73.8
Rhsim09G0021700 Rhododendron simsii HOM05D000732 ORTHO05D001037 2.6e-07 58.2 42 78.6
RhsimUnG0138000 Rhododendron simsii HOM05D000732 ORTHO05D001037 2.6e-07 58.2 42 78.6
Sed0021620 Sechium edule HOM05D000732 ORTHO05D001037 3.4e-07 57.8 42 78.6
vmacro00615 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 4.5e-07 57.4 42 78.6
vmacro00678 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 4.5e-07 57.4 42 78.6
Zm00001eb102800 Zea mays HOM05D000732 ORTHO05D001037 4.5e-07 57.4 43 74.4
HanXRQChr12g0379701 Helianthus annuus HOM05D000732 ORTHO05D001037 5.9e-07 57.0 42 78.6
HanXRQChr13g0419851 Helianthus annuus HOM05D000732 ORTHO05D001037 5.9e-07 57.0 42 73.8
SGA_v2.0_scaffold322G48601 Striga asiatica HOM05D000732 ORTHO05D001037 1.7e-06 55.5 41 75.6
ECA240G3135 Erigeron canadensis HOM05D000732 ORTHO05D001037 2.2e-06 55.1 42 73.8
Mapoly0073s0066 Marchantia polymorpha HOM05D000732 ORTHO05D001037 2.2e-06 55.1 43 67.4
Oeu020492.1 Olea europaea HOM05D000732 ORTHO05D001037 2.2e-06 55.1 42 69.0
Pp3c7_26930 Physcomitrium patens HOM05D000732 ORTHO05D001037 2.9e-06 54.7 42 69.0
SEGI_12761 Sequoiadendron giganteum HOM05D000732 ORTHO05D001037 3.8e-06 54.3 42 69.0
HPP92_005580 Vanilla planifolia HOM05D000732 ORTHO05D001037 5.0e-06 53.9 42 71.4
HPP92_005595 Vanilla planifolia HOM05D000732 ORTHO05D001037 5.0e-06 53.9 42 71.4
BcaC02g10479 Brassica carinata HOM05D000732 ORTHO05D001037 6.5e-06 53.5 39 79.5
Peaxi162Scf00504g00098 Petunia axillaris HOM05D000732 ORTHO05D001037 6.5e-06 53.5 41 75.6
ATR1127G067 Amborella trichopoda HOM05D000732 ORTHO05D007766 8.5e-06 53.1 42 69.0


User provided reference genes

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