Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p37150 Brassica napus HOM05D004533 ORTHO05D005347 3.6e-93 345.1 201 100.0
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 9.1e-81 303.9 259 75.7
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 1.6e-80 303.1 261 75.1
BcaC08g45913 Brassica carinata HOM05D004533 ORTHO05D005347 2.3e-52 209.5 245 63.3
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 8.3e-50 201.1 242 62.0
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 3.9e-47 192.2 247 58.7
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 1.5e-46 190.3 249 58.2
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 1.9e-46 189.9 247 58.3
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 1.9e-46 189.9 247 58.3
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 2.5e-46 189.5 234 61.1
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 3.3e-46 189.1 249 57.4
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 7.3e-46 188.0 249 57.4
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 3.6e-45 185.7 244 58.6
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 6.2e-45 184.9 247 59.1
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 1.4e-44 183.7 242 59.1
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 3.1e-44 182.6 244 58.2
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 4.4e-43 178.7 242 57.9
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 9.8e-43 177.6 246 58.1
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 2.2e-42 176.4 248 57.7
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 1.9e-41 173.3 243 57.2
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 3.2e-41 172.6 243 57.2
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 8.7e-23 111.3 231 49.8
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.8e-20 103.6 246 45.1
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.8e-20 103.6 246 45.1
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.8e-20 103.6 246 45.1
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 5.3e-20 102.1 230 44.8
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 5.8e-11 72.0 158 36.1
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 1.4e-09 67.4 165 33.9
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 2.7e-08 63.2 186 43.0
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 3.5e-08 62.8 166 30.1
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 3.5e-08 62.8 210 32.9
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 4.6e-08 62.4 188 32.4
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 6.0e-08 62.0 181 27.6
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.0e-07 61.2 151 31.8
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.8e-07 60.5 198 30.8
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 2.3e-07 60.1 190 27.9
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 5.1e-07 58.9 140 34.3
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 6.7e-07 58.5 232 29.7
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 1.5e-06 57.4 114 36.8
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.5e-06 57.4 189 27.5
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.9e-06 57.0 158 33.5
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.9e-06 57.0 235 26.4
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 3.3e-06 56.2 184 38.6
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 4.3e-06 55.8 162 46.3
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 5.6e-06 55.5 222 28.4
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 7.4e-06 55.1 158 34.2
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 7.4e-06 55.1 176 45.5
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 7.4e-06 55.1 185 41.6
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 9.6e-06 54.7 185 31.4


User provided reference genes

Program Settings