Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 8.3e-182 640.2 313 100.0
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 4.7e-169 597.8 341 88.3
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 7.1e-32 142.1 82 92.7
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 2.7e-31 140.2 82 91.5
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.3e-30 137.1 82 90.2
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 1.2e-18 98.2 82 67.1
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 1.1e-13 81.6 71 62.0
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 1.1e-13 81.6 71 62.0
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-12 77.8 76 59.2
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-12 76.3 80 55.0
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-12 75.9 68 60.3
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 6.3e-12 75.9 83 55.4
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-11 74.7 75 61.3
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 2.4e-11 73.9 68 60.3
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 2.4e-11 73.9 68 60.3
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 6.9e-11 72.4 69 58.0
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-10 70.1 71 56.3
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 4.5e-10 69.7 63 60.3
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 4.5e-10 69.7 68 54.4
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 1.7e-09 67.8 77 49.4
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-09 67.4 75 52.0
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 2.2e-09 67.4 75 52.0
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-09 67.0 69 53.6
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-09 66.2 63 58.7
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 6.5e-09 65.9 68 57.4
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-09 65.5 73 50.7
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-08 65.1 76 46.1
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-08 65.1 68 54.4
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-08 64.3 74 52.7
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-08 63.9 83 51.8
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-08 63.9 63 57.1
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-08 62.4 83 49.4
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-08 62.0 69 55.1
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-08 62.0 69 55.1
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.2e-07 61.6 68 52.9
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 1.6e-07 61.2 80 42.5
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-07 60.8 66 54.5
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 2.1e-07 60.8 63 55.6
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 6.1e-07 59.3 94 42.6
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-07 58.9 68 48.5
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 7.9e-07 58.9 84 46.4
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-06 58.5 69 53.6
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-06 58.5 73 49.3
BcaB04g17612 Brassica carinata HOM05D000496 ORTHO05D090729 1.4e-06 58.2 89 40.4
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-06 58.2 62 53.2
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 1.4e-06 58.2 69 47.8
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 2.3e-06 57.4 74 43.2
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 2.3e-06 57.4 74 43.2
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-06 57.0 68 51.5
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 3.0e-06 57.0 65 49.2
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-06 57.0 69 50.7
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 3.0e-06 57.0 65 49.2
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 3.0e-06 57.0 65 49.2
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 3.0e-06 57.0 66 47.0
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 3.9e-06 56.6 69 47.8
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-06 56.2 78 44.9
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 6.7e-06 55.8 72 47.2
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 6.7e-06 55.8 84 45.2
BcaC06g36712 Brassica carinata HOM05D000496 ORTHO05D032668 6.7e-06 55.8 88 39.8
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 6.7e-06 55.8 65 46.2
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-06 55.5 69 46.4
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-06 55.5 67 47.8
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 8.8e-06 55.5 69 49.3


User provided reference genes

Program Settings