Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 8.2e-160 567.0 285 100.0
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 4.5e-158 561.2 285 98.9
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 2.4e-119 432.6 289 78.9
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.4e-119 432.6 289 78.9
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 3.8e-117 425.2 286 75.5
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 4.7e-115 418.3 276 78.6
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 2.0e-113 412.9 286 73.4
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 4.7e-107 391.7 287 70.7
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 8.9e-106 387.5 275 72.7
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 5.8e-105 384.8 274 72.3
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 7.8e-94 347.8 185 93.5
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 1.0e-93 347.4 220 78.2
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 3.0e-93 345.9 220 77.7
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 3.0e-93 345.9 220 77.7
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 8.6e-85 317.8 254 66.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 8.1e-83 311.2 209 78.5
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.8e-82 310.1 197 81.2
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 2.4e-82 309.7 254 65.7
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 5.8e-81 305.1 200 79.0
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 1.5e-73 280.4 188 74.5
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 3.3e-68 262.7 175 80.6
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.4e-55 220.7 168 71.4
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 7.1e-55 218.4 162 72.8
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 1.5e-52 210.7 174 64.9
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 2.5e-52 209.9 133 80.5
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 1.3e-51 207.6 139 82.7
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 2.1e-51 206.8 191 60.7
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 2.1e-51 206.8 191 60.7
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 1.0e-48 198.0 204 54.9
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.4e-47 194.1 204 53.9
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 4.6e-46 189.1 135 73.3
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.9e-44 183.7 120 74.2
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 3.3e-44 183.0 204 52.0
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 3.3e-44 183.0 204 52.0
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 2.8e-43 179.9 198 54.0
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 4.1e-42 176.0 198 53.0
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 6.5e-40 168.7 171 56.7
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 3.6e-38 162.9 175 53.7
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 2.8e-35 153.3 153 58.8
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 3.7e-35 152.9 153 58.8
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 4.1e-34 149.4 191 46.6
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.2e-33 147.9 191 44.5
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 1.5e-33 147.5 191 44.0
BolC6t39327H Brassica oleracea HOM05D007694 ORTHO05D019925 2.0e-33 147.1 107 70.1
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.7e-32 144.1 143 56.6
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 2.2e-32 143.7 169 50.9
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 2.9e-32 143.3 191 43.5
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 6.7e-29 132.1 169 47.9
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 1.1e-26 124.8 81 69.1
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 4.2e-23 112.8 192 43.2
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 1.2e-22 111.3 102 60.8
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 6.1e-22 109.0 102 59.8
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 8.0e-22 108.6 70 78.6
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 1.0e-21 108.2 192 42.2
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 1.0e-21 108.2 102 59.8
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 1.0e-21 108.2 102 59.8
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 3.0e-21 106.7 78 73.1
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 5.2e-21 105.9 234 35.0
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 6.7e-21 105.5 198 36.9
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 8.8e-21 105.1 218 36.7
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 1.5e-20 104.4 208 38.0
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 2.0e-20 104.0 105 59.0
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 2.0e-20 104.0 185 38.4
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 3.3e-20 103.2 161 42.2
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 3.3e-20 103.2 102 57.8
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 3.3e-20 103.2 161 42.2
BcaC04g22328 Brassica carinata HOM05D000013 ORTHO05D000011 5.7e-20 102.4 58 81.0
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 9.7e-20 101.7 191 39.3
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 1.3e-19 101.3 228 36.0
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 1.7e-19 100.9 191 38.7
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 2.8e-19 100.1 191 37.2
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 3.7e-19 99.8 141 46.1
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 8.2e-19 98.6 185 38.4
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 8.2e-19 98.6 182 37.9
BcaC05g28459 Brassica carinata HOM05D007694 ORTHO05D092653 1.1e-18 98.2 68 69.1
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 1.2e-17 94.7 133 42.9
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.2e-17 94.7 133 42.9
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 1.6e-17 94.4 108 56.5
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 1.6e-17 94.4 117 49.6
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 1.6e-17 94.4 185 39.5
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.0e-17 94.0 158 40.5
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 4.5e-17 92.8 133 42.1
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 1.3e-16 91.3 82 56.1
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 3.8e-16 89.7 103 49.5
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 8.5e-16 88.6 106 47.2
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 5.5e-15 85.9 112 44.6
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 5.5e-15 85.9 112 44.6
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 9.4e-15 85.1 96 49.0
C09p20570 Brassica napus HOM05D007694 ORTHO05D040657 2.1e-14 84.0 61 70.5
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.4e-13 81.3 112 42.9
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.4e-13 81.3 168 35.7
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 4.0e-13 79.7 88 54.5
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 5.2e-13 79.3 84 52.4
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 6.8e-13 79.0 85 54.1
BolC6t39117H Brassica oleracea HOM05D007694 ORTHO05D040657 1.2e-12 78.2 51 72.5
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 2.0e-12 77.4 164 38.4
BcaC03g14420 Brassica carinata HOM05D030131 ORTHO05D021678 9.7e-12 75.1 35 94.3
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 3.7e-11 73.2 59 62.7
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 3.7e-11 73.2 121 43.0
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 8.3e-11 72.0 53 71.7
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 1.1e-10 71.6 121 42.1
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 4.1e-10 69.7 74 55.4
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 4.5e-09 66.2 59 62.7
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 4.5e-09 66.2 60 58.3
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 4.5e-09 66.2 60 58.3
BcaC07g39469 Brassica carinata HOM05D009681 ORTHO05D013235 5.5e-07 59.3 227 28.6
C07p46450 Brassica napus HOM05D009681 ORTHO05D013235 9.4e-07 58.5 132 35.6
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 2.7e-06 57.0 145 35.2
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 4.7e-06 56.2 68 45.6


User provided reference genes

Program Settings