Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p36170 Brassica napus HOM05D009339 ORTHO05D011480 5.7e-37 157.1 83 100.0
BcaC08g45823 Brassica carinata HOM05D009339 ORTHO05D011480 3.1e-35 151.4 83 97.6
BolC6t38735H Brassica oleracea HOM05D009339 ORTHO05D011480 3.1e-35 151.4 83 97.6
A07p31120 Brassica napus HOM05D009339 ORTHO05D011480 1.2e-34 149.4 83 95.2
BraA07t30747Z Brassica rapa HOM05D009339 ORTHO05D011480 7.7e-34 146.7 83 95.2
BcaB03g15540 Brassica carinata HOM05D009339 ORTHO05D011480 6.7e-30 133.7 83 86.7
BcaB03g14788 Brassica carinata HOM05D009339 ORTHO05D011480 3.8e-25 117.9 82 74.4
BcaB05g24544 Brassica carinata HOM05D009339 ORTHO05D011480 3.3e-21 104.8 84 69.0
AT1G70270 Arabidopsis thaliana HOM05D009339 ORTHO05D011480 5.7e-21 104.0 84 70.2
Thhalv10019382m.g Eutrema salsugineum HOM05D009339 ORTHO05D011480 1.3e-20 102.8 86 70.9
Carub.0002s1695 Capsella rubella HOM05D009339 ORTHO05D011480 2.2e-20 102.1 83 68.7
BcaC03g15173 Brassica carinata HOM05D009339 ORTHO05D011480 2.4e-19 98.6 84 67.9
CARHR063390 Cardamine hirsuta HOM05D009339 ORTHO05D011480 2.0e-18 95.5 85 63.5
AL2G29560 Arabidopsis lyrata HOM05D009339 ORTHO05D011480 2.7e-18 95.1 84 66.7
C02p27480 Brassica napus HOM05D009339 ORTHO05D011480 3.8e-17 91.3 84 64.3
BolC2t08807H Brassica oleracea HOM05D009339 ORTHO05D011480 3.8e-17 91.3 84 64.3
BraA02t06702Z Brassica rapa HOM05D009339 ORTHO05D011480 3.8e-17 91.3 84 64.3
Sp5g25380 Schrenkiella parvula HOM05D009339 ORTHO05D011480 3.8e-17 91.3 90 62.2
A02p16430 Brassica napus HOM05D009339 ORTHO05D011480 3.0e-14 81.6 50 80.0
AT1G23995 Arabidopsis thaliana HOM05D009339 ORTHO05D011480 9.1e-11 70.1 80 46.2
Aa31LG7G7790 Aethionema arabicum HOM05D009339 ORTHO05D011480 4.5e-10 67.8 83 53.0
AL1G37750 Arabidopsis lyrata HOM05D009339 ORTHO05D011480 3.8e-09 64.7 82 45.1
AT1G23965 Arabidopsis thaliana HOM05D009339 ORTHO05D011480 1.9e-08 62.4 82 43.9
Sp1g21270 Schrenkiella parvula HOM05D009339 ORTHO05D011480 3.2e-08 61.6 49 55.1
BcaB03g11960 Brassica carinata HOM05D009339 ORTHO05D011480 7.2e-08 60.5 47 55.3
A08p27960 Brassica napus HOM05D009339 ORTHO05D011480 2.7e-07 58.5 45 55.6
BraA08t34727Z Brassica rapa HOM05D009339 ORTHO05D011480 2.7e-07 58.5 45 55.6
BcaB07g32369 Brassica carinata HOM05D009339 ORTHO05D011480 3.6e-07 58.2 47 53.2
THA.LOC109117024 Tarenaya hassleriana HOM05D009339 ORTHO05D011480 4.7e-07 57.8 68 50.0
BolC8t49863H Brassica oleracea HOM05D009339 ORTHO05D011480 6.1e-07 57.4 45 51.1
CANSAT01G1518 Cannabis sativa HOM05D008443 ORTHO05D010587 4.0e-06 54.7 51 56.9
ClCG05G025160 Citrullus lanatus HOM05D008443 ORTHO05D010587 6.8e-06 53.9 70 45.7


User provided reference genes

Program Settings