Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 6.7e-69 263.8 129 100.0
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 5.5e-47 191.0 98 98.0
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 5.5e-47 191.0 98 98.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 5.5e-47 191.0 98 98.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.0e-45 186.8 98 95.9
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 7.5e-44 180.6 101 93.1
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 7.5e-44 180.6 101 93.1
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 8.2e-43 177.2 101 90.1
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.7e-40 169.5 103 87.4
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 2.9e-40 168.7 102 88.2
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 6.5e-40 167.5 105 84.8
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.5e-39 166.4 102 87.3
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 2.1e-38 162.5 101 87.1
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 4.7e-38 161.4 101 86.1
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 1.8e-37 159.5 101 85.1
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 7.5e-36 154.1 101 83.2
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 5.4e-34 147.9 100 83.0
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.1e-31 140.2 99 78.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 6.3e-27 124.4 100 68.0
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 5.4e-26 121.3 100 68.0
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 5.4e-26 121.3 103 63.1
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 7.0e-26 120.9 100 69.0
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.6e-25 119.8 100 68.0
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.6e-25 119.8 103 62.1
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.5e-25 118.6 98 67.3
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 1.3e-24 116.7 100 62.0
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 1.7e-24 116.3 100 63.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 2.3e-24 115.9 100 65.0
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 5.0e-24 114.8 103 63.1
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 5.0e-24 114.8 103 66.0
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.0e-24 114.8 100 63.0
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.0e-24 114.8 100 63.0
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 5.0e-24 114.8 100 63.0
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 8.6e-24 114.0 101 62.4
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.5e-23 113.2 100 64.0
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 2.5e-23 112.5 100 61.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 2.5e-23 112.5 102 64.7
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 2.5e-23 112.5 102 64.7
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 2.5e-23 112.5 102 62.7
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 5.6e-23 111.3 100 63.0
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 9.5e-23 110.5 101 63.4
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 2.8e-22 109.0 97 66.0
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 3.6e-22 108.6 100 60.0
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.7e-22 108.2 103 60.2
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 6.1e-22 107.8 100 62.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.0e-21 107.1 100 59.0
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.0e-21 107.1 100 60.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.0e-21 107.1 100 60.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 1.4e-21 106.7 104 58.7
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.4e-21 106.7 100 60.0
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.4e-21 106.7 102 64.7
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.8e-21 106.3 104 58.7
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 2.3e-21 105.9 104 58.7
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 2.3e-21 105.9 104 60.6
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.0e-21 105.5 100 59.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 4.0e-21 105.1 92 66.3
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 4.0e-21 105.1 100 61.0
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 5.2e-21 104.8 100 60.0
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 5.2e-21 104.8 101 58.4
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 5.2e-21 104.8 104 58.7
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 8.9e-21 104.0 98 61.2
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.2e-20 103.6 100 58.0
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.2e-20 103.6 100 60.0
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.5e-20 103.2 99 59.6
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.6e-20 102.4 100 57.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.6e-20 102.4 100 59.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 3.4e-20 102.1 100 57.0
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 9.8e-20 100.5 100 56.0
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 9.8e-20 100.5 103 57.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 9.8e-20 100.5 100 58.0
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.2e-19 99.4 108 52.8
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 2.2e-19 99.4 100 59.0
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 2.2e-19 99.4 100 59.0
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 3.7e-19 98.6 104 59.6
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 6.4e-19 97.8 97 58.8
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 8.3e-19 97.4 100 57.0
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 8.3e-19 97.4 93 62.4
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.1e-18 97.1 93 57.0
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.1e-18 97.1 103 59.2
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.4e-18 96.7 113 56.6
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.8e-18 96.3 99 55.6
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 2.4e-18 95.9 100 59.0
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 3.2e-18 95.5 104 57.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 4.1e-18 95.1 103 54.4
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 5.9e-17 91.3 100 54.0
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 5.9e-17 91.3 103 56.3
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 7.8e-17 90.9 97 55.7
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.0e-16 90.5 100 53.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 3.0e-16 89.0 97 54.6
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 8.6e-16 87.4 101 55.4
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 2.5e-15 85.9 91 56.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 3.6e-14 82.0 100 48.0
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 5.2e-13 78.2 77 57.1
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 6.8e-13 77.8 90 52.2
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 3.4e-12 75.5 102 50.0
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-11 73.2 65 63.1
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.1e-10 70.5 84 52.4
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.3e-08 63.5 88 46.6
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 5.0e-08 61.6 52 61.5


User provided reference genes

Program Settings