Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p34360 Brassica napus HOM05D050267 ORTHO05D032347 2.1e-49 198.7 103 100.0
C06p34390 Brassica napus HOM05D050267 ORTHO05D032347 8.9e-48 193.4 103 95.1
BcaC08g45676 Brassica carinata HOM05D000506 ORTHO05D032347 3.3e-18 95.1 49 95.9
BcaC03g15441 Brassica carinata HOM05D000506 ORTHO05D000369 3.6e-09 65.1 46 69.6
A07p39060 Brassica napus HOM05D000506 ORTHO05D000369 4.8e-09 64.7 46 71.7
C06p47270 Brassica napus HOM05D000506 ORTHO05D000369 4.8e-09 64.7 46 71.7
BolC6t39766H Brassica oleracea HOM05D000506 ORTHO05D000369 4.8e-09 64.7 46 71.7
BraA07t31456Z Brassica rapa HOM05D000506 ORTHO05D000369 4.8e-09 64.7 46 71.7
Carub.0002s1981 Capsella rubella HOM05D000506 ORTHO05D000369 4.8e-09 64.7 45 73.3
AL2G32800 Arabidopsis lyrata HOM05D000506 ORTHO05D000369 6.2e-09 64.3 45 73.3
Aa31LG4G3340 Aethionema arabicum HOM05D000506 ORTHO05D000369 8.1e-09 63.9 45 71.1
BcaB05g24799 Brassica carinata HOM05D000506 ORTHO05D000369 8.1e-09 63.9 45 71.1
Sp5g28010 Schrenkiella parvula HOM05D000506 ORTHO05D000369 8.1e-09 63.9 45 71.1
CARHR066020 Cardamine hirsuta HOM05D000506 ORTHO05D000369 1.1e-08 63.5 45 71.1
AT1G73050 Arabidopsis thaliana HOM05D000506 ORTHO05D000369 1.4e-08 63.2 45 68.9
BcaB05g24798 Brassica carinata HOM05D000506 ORTHO05D000369 1.4e-08 63.2 45 68.9
A02p18430 Brassica napus HOM05D000506 ORTHO05D000369 1.4e-08 63.2 45 68.9
C02p30510 Brassica napus HOM05D000506 ORTHO05D000369 1.4e-08 63.2 45 68.9
BraA02t06882Z Brassica rapa HOM05D000506 ORTHO05D000369 1.4e-08 63.2 45 68.9
Thhalv10018360m.g Eutrema salsugineum HOM05D000506 ORTHO05D000369 3.1e-08 62.0 45 68.9
vmacro18703 Vaccinium macrocarpon HOM05D000506 ORTHO05D000369 4.5e-07 58.2 43 62.8
Prupe.3G168200 Prunus persica HOM05D000506 ORTHO05D000369 5.8e-07 57.8 43 62.8
Thecc.06G016600 Theobroma cacao HOM05D000506 ORTHO05D000369 7.6e-07 57.4 43 65.1
Duzib192G0238 Durio zibethinus HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 65.1
FvH4_6g37470 Fragaria vesca HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 60.5
FAN02G1359 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 60.5
FAN05G2289 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 60.5
FAN09G4079 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 60.5
FAN14G4772 Fragaria x ananassa HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 60.5
Peaxi162Scf00038g02414 Petunia axillaris HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 62.8
RcHm_v2.0_Chr2g0150311 Rosa chinensis HOM05D000506 ORTHO05D000369 1.3e-06 56.6 43 60.5
Atru.chr1.2772 Acer truncatum HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
CSS0007240 Camellia sinensis var. sinensis HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
AUR62033039 Chenopodium quinoa HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
AUR62042005 Chenopodium quinoa HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
Cc04_g00480 Coffea canephora HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 65.1
MD09G1157800 Malus domestica HOM05D000506 ORTHO05D000369 1.7e-06 56.2 42 61.9
MD17G1143800 Malus domestica HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
Nitab4.5_0001691g0010 Nicotiana tabacum HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
Nitab4.5_0002885g0010 Nicotiana tabacum HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
Sabra08G0005600 Salix brachista HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 65.1
Hund22374 Selenicereus undatus HOM05D000506 ORTHO05D000369 1.7e-06 56.2 43 62.8
EL10Ac8g19459 Beta vulgaris HOM05D000506 ORTHO05D000369 2.2e-06 55.8 43 62.8
Ciclev10025302m.g Citrus clementina HOM05D000506 ORTHO05D000369 2.2e-06 55.8 43 62.8
PGR031G1489 Punica granatum HOM05D000506 ORTHO05D000369 2.2e-06 55.8 43 58.1
Rhsim08G0246700 Rhododendron simsii HOM05D000506 ORTHO05D000369 2.2e-06 55.8 43 60.5
PGSC0003DMG400009158 Solanum tuberosum HOM05D000506 ORTHO05D000369 2.2e-06 55.8 43 62.8
Actinidia21858 Actinidia chinensis HOM05D000506 ORTHO05D000369 2.9e-06 55.5 46 54.3
CAN.G790.41 Capsicum annuum HOM05D000506 ORTHO05D000369 2.9e-06 55.5 43 62.8
COL.COLO4_22863 Corchorus olitorius HOM05D000506 ORTHO05D000369 2.9e-06 55.5 41 61.0
Eucgr.J03148 Eucalyptus grandis HOM05D000506 ORTHO05D000369 2.9e-06 55.5 43 60.5
Oeu053402.1 Olea europaea HOM05D000506 ORTHO05D000369 2.9e-06 55.5 43 62.8
Potri.008G009600 Populus trichocarpa HOM05D000506 ORTHO05D000369 2.9e-06 55.5 39 69.2
arahy.Tifrunner.gnm1.ann1.UB9II0 Arachis hypogaea HOM05D000506 ORTHO05D000369 3.8e-06 55.1 43 62.8
arahy.Tifrunner.gnm1.ann1.XZF9WK Arachis hypogaea HOM05D000506 ORTHO05D000369 3.8e-06 55.1 43 62.8
Dinv20363 Davidia involucrata HOM05D000506 ORTHO05D000369 3.8e-06 55.1 43 60.5
SalBow7G2296 Salvia bowleyana HOM05D000506 ORTHO05D000369 3.8e-06 55.1 43 62.8
CiPaw.02G129800 Carya illinoinensis HOM05D000506 ORTHO05D000369 4.9e-06 54.7 43 60.5
DCAR_022629 Daucus carota HOM05D000506 ORTHO05D000369 4.9e-06 54.7 43 62.8
Migut.D00900 Erythranthe guttata HOM05D000506 ORTHO05D000369 4.9e-06 54.7 43 60.5
Cfa003446 Carpinus fangiana HOM05D000506 ORTHO05D000369 6.4e-06 54.3 43 60.5
Dinv06729 Davidia involucrata HOM05D000506 ORTHO05D000369 6.4e-06 54.3 43 60.5
Lalb_Chr01g0011741 Lupinus albus HOM05D000506 ORTHO05D000369 6.4e-06 54.3 46 58.7
TWI12G1323 Tripterygium wilfordii HOM05D000506 ORTHO05D000369 6.4e-06 54.3 43 62.8
Ah.14g085750 Amaranthus hybridus HOM05D000506 ORTHO05D000369 8.4e-06 53.9 43 60.5
Ca_20957_v3 Cicer arietinum L. HOM05D000506 ORTHO05D000369 8.4e-06 53.9 47 53.2
Ca_20958_v3 Cicer arietinum L. HOM05D000506 ORTHO05D000369 8.4e-06 53.9 47 53.2


User provided reference genes

Program Settings