Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-27 123.6 58 100.0
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 4.9e-27 123.6 58 100.0
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 1.8e-21 105.1 55 85.5
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 1.8e-21 105.1 55 85.5
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-21 105.1 55 85.5
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-21 105.1 55 85.5
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-21 105.1 55 85.5
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 1.8e-21 105.1 55 85.5
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 1.8e-21 105.1 55 85.5
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 1.8e-21 105.1 55 85.5
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-21 105.1 55 85.5
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 4.0e-21 104.0 55 83.6
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 5.2e-21 103.6 55 81.8
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 5.2e-21 103.6 55 83.6
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 5.2e-21 103.6 55 83.6
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 1.5e-20 102.1 55 83.6
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-19 97.1 55 74.5
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 3.9e-16 87.4 56 73.2
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 3.3e-15 84.3 55 65.5
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.2e-11 71.6 54 53.7
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-10 67.8 55 50.9
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-10 67.8 55 50.9
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-10 67.8 55 50.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-10 67.4 47 57.4
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 7.1e-10 66.6 55 50.9
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 9.2e-10 66.2 55 49.1
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 9.2e-10 66.2 57 50.9
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 9.2e-10 66.2 55 50.9
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-09 65.9 55 49.1
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.2e-09 65.9 55 49.1
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-09 65.1 55 49.1
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 3.5e-09 64.3 55 47.3
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-09 64.3 55 49.1
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-09 64.3 55 50.9
BraA01t02487Z Brassica rapa HOM05D008062 ORTHO05D008395 3.5e-09 64.3 32 81.2
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-09 63.9 55 49.1
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 4.6e-09 63.9 55 47.3
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 6.0e-09 63.5 55 47.3
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 6.0e-09 63.5 55 47.3
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-08 62.4 47 53.2
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-08 62.4 55 47.3
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-08 61.6 55 45.5
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-08 60.8 55 45.5
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 3.9e-08 60.8 55 45.5
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-08 60.8 55 45.5
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.9e-08 60.8 55 45.5
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 3.9e-08 60.8 55 45.5
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 6.6e-08 60.1 44 54.5
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 6.6e-08 60.1 55 45.5
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 6.6e-08 60.1 55 45.5
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 6.6e-08 60.1 55 45.5
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 6.6e-08 60.1 55 45.5
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 8.6e-08 59.7 55 43.6
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 8.6e-08 59.7 55 43.6
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 8.6e-08 59.7 55 43.6
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.1e-07 59.3 55 47.3
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-07 58.9 55 45.5
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-07 58.9 47 51.1
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-07 58.9 55 45.5
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-07 58.5 55 43.6
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-07 58.5 55 43.6
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 1.9e-07 58.5 55 43.6
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-07 57.8 55 43.6
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-07 57.8 55 43.6
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 3.3e-07 57.8 55 43.6
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 4.3e-07 57.4 45 51.1
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 4.3e-07 57.4 55 41.8
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 5.6e-07 57.0 55 41.8
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 7.3e-07 56.6 56 42.9
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 1.2e-06 55.8 55 41.8
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 1.2e-06 55.8 55 41.8
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-06 55.5 55 43.6
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 6.2e-06 53.5 54 48.1
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 6.2e-06 53.5 55 45.5


User provided reference genes

Program Settings