Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.4e-201 706.1 353 100.0
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.4e-201 706.1 353 100.0
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 8.2e-194 680.2 353 96.6
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.5e-192 676.0 353 95.5
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 3.8e-191 671.4 353 94.9
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.5e-174 615.5 356 87.6
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.2e-174 614.8 356 87.6
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 7.5e-171 604.0 356 87.4
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.7e-170 602.8 356 86.5
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.2e-168 596.7 356 86.8
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.7e-165 584.7 356 83.7
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.1e-157 559.3 288 96.5
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 4.7e-141 505.0 363 71.9
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.6e-139 499.2 325 77.8
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 4.9e-138 495.0 325 77.8
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.4e-137 493.4 351 72.1
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 5.4e-137 491.5 346 72.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 9.2e-137 490.7 305 79.7
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.2e-136 490.3 356 72.8
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 1.6e-136 490.0 337 73.3
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 2.7e-136 489.2 308 78.6
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.6e-136 488.4 356 71.6
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 6.0e-136 488.0 323 77.4
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.7e-135 486.5 357 70.9
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.3e-135 486.1 303 79.9
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 3.0e-135 485.7 342 73.1
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 3.0e-135 485.7 304 79.9
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 8.6e-135 484.2 305 79.7
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 8.6e-135 484.2 304 79.6
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.1e-134 483.8 305 79.3
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.1e-134 483.8 310 78.1
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 5.6e-134 481.5 356 70.5
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 5.6e-134 481.5 304 79.3
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.2e-133 480.3 307 77.9
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 1.2e-133 480.3 334 73.7
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.2e-133 480.3 303 78.2
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.6e-133 479.9 316 76.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 4.7e-133 478.4 300 79.3
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 4.7e-133 478.4 354 69.5
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.1e-132 477.2 354 69.5
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.4e-132 476.9 356 69.1
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.8e-132 476.5 308 77.9
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.3e-132 476.1 340 72.9
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.1e-132 475.7 305 78.0
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 4.0e-132 475.3 305 77.0
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.5e-131 473.4 303 78.9
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 2.6e-131 472.6 301 77.4
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 2.6e-131 472.6 301 77.4
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 3.4e-131 472.2 301 77.4
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 5.8e-131 471.5 318 73.6
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 9.9e-131 470.7 304 77.3
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.3e-130 470.3 304 78.0
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.7e-130 469.9 301 77.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.2e-130 469.5 312 76.9
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.2e-130 469.5 305 76.7
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 2.9e-130 469.2 309 75.4
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 4.9e-130 468.4 319 73.7
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 2.4e-129 466.1 307 76.2
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 7.1e-129 464.5 334 69.2
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.2e-128 463.8 301 78.4
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 2.1e-128 463.0 302 77.5
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 2.1e-128 463.0 312 75.3
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 4.6e-128 461.8 303 73.9
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 4.6e-128 461.8 301 76.1
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 7.8e-128 461.1 314 74.5
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 2.3e-127 459.5 350 66.9
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 3.0e-127 459.1 362 66.6
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 3.9e-127 458.8 304 76.3
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 6.6e-127 458.0 345 70.4
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.1e-126 457.2 356 68.8
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 1.1e-126 457.2 302 77.2
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.2e-125 453.8 326 70.9
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.1e-125 453.0 326 71.5
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 8.1e-125 451.1 274 79.6
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.1e-124 449.1 299 76.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.4e-121 440.3 309 72.2
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 2.4e-121 439.5 312 71.5
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.3e-119 433.7 304 71.7
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 4.8e-117 425.2 327 67.0
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.8e-116 423.3 299 71.9
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 2.2e-114 416.4 397 56.2
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 1.0e-111 407.5 303 69.3
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 8.7e-111 404.4 302 68.5
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.1e-110 404.1 307 68.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.5e-110 403.7 307 67.1
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 2.8e-109 399.4 449 51.9
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 3.1e-108 396.0 319 63.3
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.9e-102 376.7 289 65.7
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 8.2e-101 371.3 239 77.0
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 1.8e-100 370.2 409 52.1
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.5e-99 367.1 201 91.5
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 4.9e-98 362.1 213 84.0
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 5.5e-97 358.6 308 60.7
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 5.9e-91 338.6 210 81.9
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 7.7e-83 311.6 303 56.8
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.6e-80 303.9 338 50.3
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 8.8e-79 298.1 167 88.6
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.4e-76 290.8 208 72.1
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.4e-76 290.0 203 75.4
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 3.4e-75 286.2 166 85.5
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.0e-74 284.6 239 65.7
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.7e-74 283.9 239 65.7
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.4e-71 274.2 193 75.1
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.0e-71 273.1 193 74.6
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.7e-71 271.9 151 88.1
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 1.5e-70 270.8 304 51.3
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.3e-70 269.6 188 75.5
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.3e-69 267.7 255 51.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 4.8e-69 265.8 166 80.7
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.2e-62 244.6 141 83.7
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 1.2e-59 234.6 144 77.8
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.0e-58 231.5 267 47.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.3e-58 231.1 189 65.1
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.3e-42 177.9 108 82.4
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 7.8e-35 152.1 96 72.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.8e-31 141.0 238 36.1
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 1.3e-29 134.8 129 56.6
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.9e-28 131.0 80 80.0
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.4e-22 109.8 99 52.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-20 104.8 258 32.2
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 3.4e-14 83.6 48 77.1
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.0e-10 70.5 57 63.2
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 1.1e-09 68.6 144 36.8


User provided reference genes

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