Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p31700 Brassica napus HOM05D001626 ORTHO05D039051 7.1e-46 186.8 88 100.0
BcaC08g45499 Brassica carinata HOM05D001626 ORTHO05D039051 9.6e-35 149.8 72 98.6
Sp5g32060 Schrenkiella parvula HOM05D001626 ORTHO05D001563 3.4e-24 114.8 61 85.2
Thhalv10019060m.g Eutrema salsugineum HOM05D001626 ORTHO05D001563 8.7e-20 100.1 71 73.2
Carub.0002s2380 Capsella rubella HOM05D001626 ORTHO05D001563 1.4e-14 82.8 55 76.4
Aa31LG7G5330 Aethionema arabicum HOM05D001626 ORTHO05D001563 2.5e-14 82.0 65 69.2
CARHR070440 Cardamine hirsuta HOM05D001626 ORTHO05D001563 5.5e-14 80.9 56 71.4
AL2G37070 Arabidopsis lyrata HOM05D001626 ORTHO05D001563 7.9e-13 77.0 54 72.2
THA.LOC104812049 Tarenaya hassleriana HOM05D001626 ORTHO05D001563 1.1e-11 73.2 70 61.4
THA.LOC104802330 Tarenaya hassleriana HOM05D001626 ORTHO05D001563 5.7e-11 70.9 65 58.5
THA.LOC104813704 Tarenaya hassleriana HOM05D001626 ORTHO05D001563 5.7e-11 70.9 65 58.5
Thhalv10008603m.g Eutrema salsugineum HOM05D001626 ORTHO05D001563 1.4e-09 66.2 77 49.4
AT1G76940 Arabidopsis thaliana HOM05D001626 ORTHO05D001563 1.8e-09 65.9 54 64.8
Sp1g18870 Schrenkiella parvula HOM05D001626 ORTHO05D001563 1.8e-09 65.9 76 52.6
BolC7t42762H Brassica oleracea HOM05D001626 ORTHO05D001563 5.3e-09 64.3 56 66.1
A07p42520 Brassica napus HOM05D001626 ORTHO05D001563 9.1e-09 63.5 49 69.4
QL02p024321 Quercus lobata HOM05D001626 ORTHO05D001563 9.1e-09 63.5 77 48.1
C06p51080 Brassica napus HOM05D001626 ORTHO05D001563 1.2e-08 63.2 48 70.8
BcaB03g14274 Brassica carinata HOM05D001626 ORTHO05D001563 1.5e-08 62.8 56 60.7
BcaC06g34872 Brassica carinata HOM05D001626 ORTHO05D001563 1.5e-08 62.8 64 60.9
BcaC08g47194 Brassica carinata HOM05D001626 ORTHO05D001563 1.5e-08 62.8 48 70.8
C07p22320 Brassica napus HOM05D001626 ORTHO05D001563 1.5e-08 62.8 64 60.9
BolC6t40132H Brassica oleracea HOM05D001626 ORTHO05D001563 1.5e-08 62.8 48 70.8
BraA07t31776Z Brassica rapa HOM05D001626 ORTHO05D001563 1.5e-08 62.8 48 70.8
AL1G34410 Arabidopsis lyrata HOM05D001626 ORTHO05D001563 3.4e-08 61.6 65 56.9
CiPaw.15G017600 Carya illinoinensis HOM05D001626 ORTHO05D001563 1.3e-07 59.7 66 50.0
A06p17360 Brassica napus HOM05D001626 ORTHO05D001563 1.7e-07 59.3 52 57.7
BraA06t24833Z Brassica rapa HOM05D001626 ORTHO05D001563 1.7e-07 59.3 52 57.7
Gohir.D05G243800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 2.2e-07 58.9 63 50.8
Gorai.009G253100 Gossypium raimondii HOM05D001626 ORTHO05D001563 2.2e-07 58.9 63 50.8
AT1G21320 Arabidopsis thaliana HOM05D001626 ORTHO05D001563 2.9e-07 58.5 65 50.8
Dinv25843 Davidia involucrata HOM05D001626 ORTHO05D001563 2.9e-07 58.5 56 57.1
A07p15200 Brassica napus HOM05D001626 ORTHO05D001563 5.0e-07 57.8 67 55.2
Haze_17738 Corylus avellana HOM05D001626 ORTHO05D001563 5.0e-07 57.8 68 48.5
Duzib116G0253 Durio zibethinus HOM05D001626 ORTHO05D001563 6.5e-07 57.4 63 47.6
ClCG08G006630 Citrullus lanatus HOM05D001626 ORTHO05D001563 8.5e-07 57.0 61 54.1
Gorai.002G055200 Gossypium raimondii HOM05D001626 ORTHO05D001563 1.1e-06 56.6 79 45.6
Gohir.D03G060609 Gossypium hirsutum HOM05D001626 ORTHO05D001563 1.4e-06 56.2 80 45.0
Gohir.A02G112703 Gossypium hirsutum HOM05D001626 ORTHO05D001563 1.9e-06 55.8 79 45.6
Thecc.08G148600 Theobroma cacao HOM05D001626 ORTHO05D001563 1.9e-06 55.8 63 47.6
BcaC05g26035 Brassica carinata HOM05D001626 ORTHO05D001563 2.5e-06 55.5 62 50.0
BraA07t29260Z Brassica rapa HOM05D001626 ORTHO05D001563 2.5e-06 55.5 57 57.9
C05p20190 Brassica napus HOM05D001626 ORTHO05D001563 3.2e-06 55.1 68 48.5
BolC5t30713H Brassica oleracea HOM05D001626 ORTHO05D001563 3.2e-06 55.1 68 48.5
BcaB03g12820 Brassica carinata HOM05D001626 ORTHO05D001563 4.2e-06 54.7 54 53.7
Cpa.g.c41892 Carica papaya HOM05D001626 ORTHO05D001563 4.2e-06 54.7 59 50.8
MELO3C008389.2 Cucumis melo HOM05D001626 ORTHO05D001563 4.2e-06 54.7 61 52.5
CsaV3_6G029690 Cucumis sativus L. HOM05D001626 ORTHO05D001563 4.2e-06 54.7 61 52.5
CiPaw.16G014700 Carya illinoinensis HOM05D001626 ORTHO05D001563 5.5e-06 54.3 80 41.2
VMungo0464G0210 Vigna mungo HOM05D001626 ORTHO05D001563 5.5e-06 54.3 65 46.2
CSS0035605 Camellia sinensis var. sinensis HOM05D001626 ORTHO05D001563 7.2e-06 53.9 67 43.3
Cc10_g14060 Coffea canephora HOM05D001626 ORTHO05D001563 9.4e-06 53.5 74 44.6


User provided reference genes

Program Settings