Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p30180 Brassica napus HOM05D068201 ORTHO05D042045 1.2e-83 313.2 162 100.0
BolC6t38181H Brassica oleracea HOM05D068201 ORTHO05D042045 1.2e-83 313.2 162 100.0
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-23 114.0 60 100.0
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 2.7e-14 82.8 102 49.0
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.3e-13 80.5 106 49.1
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.3e-13 80.5 106 49.1
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.7e-13 80.1 100 48.0
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.9e-12 76.6 99 49.5
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 4.2e-12 75.5 103 46.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 9.5e-12 74.3 100 45.0
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 9.5e-12 74.3 100 45.0
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 1.2e-11 73.9 103 45.6
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 3.6e-11 72.4 100 44.0
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 9.8e-09 64.3 106 40.6
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.7e-08 62.4 106 39.6
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 3.7e-08 62.4 106 39.6
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.8e-07 60.1 87 41.4
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 7.0e-07 58.2 70 44.3
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 7.0e-07 58.2 65 53.8
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 7.7e-06 54.7 71 42.3
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 7.7e-06 54.7 102 30.4


User provided reference genes

Program Settings