Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p29730 Brassica napus HOM05D003613 ORTHO05D004055 1.6e-15 84.7 38 100.0
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.1e-14 80.5 37 94.6
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 3.1e-14 80.5 37 94.6
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 6.9e-14 79.3 37 91.9
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 6.9e-14 79.3 37 91.9
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 2.0e-13 77.8 37 89.2
BraA07t30345Z Brassica rapa HOM05D003613 ORTHO05D004055 4.5e-13 76.6 34 97.1
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.0e-12 75.5 37 86.5
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.2e-12 74.3 37 83.8
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 2.9e-12 73.9 37 89.2
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 2.9e-12 73.9 37 89.2
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 4.9e-12 73.2 37 83.8
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 6.5e-12 72.8 37 86.5
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.1e-11 72.0 37 81.1
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 1.9e-11 71.2 37 83.8
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 1.9e-11 71.2 37 83.8
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 5.5e-11 69.7 37 81.1
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 7.1e-11 69.3 37 81.1
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 4.6e-10 66.6 37 75.7
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 4.6e-10 66.6 37 78.4
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 4.6e-10 66.6 37 78.4
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 6.0e-10 66.2 37 78.4
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 6.0e-10 66.2 37 75.7
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 6.0e-10 66.2 37 75.7
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 6.0e-10 66.2 37 75.7
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 7.9e-10 65.9 37 75.7
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 7.9e-10 65.9 37 73.0
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 7.9e-10 65.9 37 75.7
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 7.9e-10 65.9 37 75.7
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 7.9e-10 65.9 37 73.0
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 3.9e-09 63.5 37 75.7
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.5e-08 61.6 37 70.3
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 3.3e-08 60.5 38 71.1
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 3.3e-08 60.5 38 71.1
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 3.3e-08 60.5 38 71.1
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 3.3e-08 60.5 38 71.1
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 3.3e-08 60.5 38 71.1
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 7.4e-08 59.3 37 67.6
BcaC05g27427 Brassica carinata HOM05D003613 ORTHO05D004055 4.8e-07 56.6 35 80.0
A02p02510 Brassica napus HOM05D000736 ORTHO05D017680 6.2e-07 56.2 26 92.3
C01p30220 Brassica napus HOM05D000736 ORTHO05D017680 8.2e-07 55.8 26 92.3
C08p37600 Brassica napus HOM05D000736 ORTHO05D017680 8.2e-07 55.8 26 92.3
BolC1t02963H Brassica oleracea HOM05D000736 ORTHO05D017680 8.2e-07 55.8 26 92.3
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.4e-06 55.1 37 64.9
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 1.8e-06 54.7 37 67.6
BcaC09g50000 Brassica carinata HOM05D034825 ORTHO05D032742 2.4e-06 54.3 26 88.5
C05p58540 Brassica napus HOM05D000736 ORTHO05D017680 4.0e-06 53.5 26 88.5


User provided reference genes

Program Settings