Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p28690 Brassica napus HOM05D006831 ORTHO05D008256 1.1e-152 543.5 311 100.0
BolC6t38038H Brassica oleracea HOM05D006831 ORTHO05D008256 4.9e-150 534.6 311 98.1
A07p26290 Brassica napus HOM05D006831 ORTHO05D008256 4.0e-144 515.0 316 92.1
BraA07t30273Z Brassica rapa HOM05D006831 ORTHO05D008256 4.0e-144 515.0 316 92.1
BcaC08g45266 Brassica carinata HOM05D006831 ORTHO05D008256 8.1e-137 490.7 268 93.7
Sp5g36010 Schrenkiella parvula HOM05D006831 ORTHO05D008256 1.5e-119 433.3 323 74.3
Carub.0002s2775 Capsella rubella HOM05D006831 ORTHO05D008256 5.1e-115 418.3 271 76.8
Thhalv10018887m.g Eutrema salsugineum HOM05D006831 ORTHO05D008256 1.5e-114 416.8 322 76.1
AT1G79760 Arabidopsis thaliana HOM05D006831 ORTHO05D008256 2.5e-114 416.0 274 78.8
AL2G41800 Arabidopsis lyrata HOM05D006831 ORTHO05D008256 1.4e-112 410.2 314 75.8
CARHR262750 Cardamine hirsuta HOM05D006831 ORTHO05D008256 2.5e-106 389.4 266 75.2
Aa31LG4G70 Aethionema arabicum HOM05D006831 ORTHO05D008256 9.7e-82 307.8 330 54.5
Thecc.06G098700 Theobroma cacao HOM05D006831 ORTHO05D008256 1.9e-48 197.2 321 38.3
Duzib235G1306 Durio zibethinus HOM05D006831 ORTHO05D008256 2.1e-47 193.7 321 38.0
COL.COLO4_30498 Corchorus olitorius HOM05D006831 ORTHO05D008256 4.6e-47 192.6 325 37.8
Gohir.D03G058400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 1.7e-46 190.7 325 37.5
Gorai.003G062200 Gossypium raimondii HOM05D006831 ORTHO05D008256 1.7e-46 190.7 325 37.5
Gohir.A02G117700 Gossypium hirsutum HOM05D006831 ORTHO05D008256 8.6e-46 188.3 325 37.2
Gohir.A10G066100 Gossypium hirsutum HOM05D006831 ORTHO05D008256 7.3e-45 185.3 326 38.7
Gohir.D10G067400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 1.6e-44 184.1 330 38.2
Gorai.011G071900 Gossypium raimondii HOM05D006831 ORTHO05D008256 1.6e-44 184.1 326 38.3
CARHR262770 Cardamine hirsuta HOM05D006831 ORTHO05D008256 3.6e-44 183.0 114 78.9
vmacro18857 Vaccinium macrocarpon HOM05D006831 ORTHO05D008256 8.1e-44 181.8 318 36.5
Rhsim08G0227100 Rhododendron simsii HOM05D006831 ORTHO05D008256 1.2e-42 177.9 315 37.5
Dinv30442 Davidia involucrata HOM05D006831 ORTHO05D008256 2.6e-42 176.8 321 36.8
THA.LOC104801499 Tarenaya hassleriana HOM05D006831 ORTHO05D008256 4.4e-42 176.0 271 42.1
Ciclev10025849m.g Citrus clementina HOM05D006831 ORTHO05D008256 5.8e-42 175.6 320 36.9
Hma1.2p1_0430F.1_g151466 Hydrangea macrophylla HOM05D006831 ORTHO05D008256 9.9e-42 174.9 327 34.9
Sed0018864 Sechium edule HOM05D006831 ORTHO05D008256 1.3e-41 174.5 289 39.1
FvH4_6g32300 Fragaria vesca HOM05D006831 ORTHO05D008256 1.7e-41 174.1 323 36.8
FAN05G2796 Fragaria x ananassa HOM05D006831 ORTHO05D008256 3.7e-41 172.9 323 36.8
ClCG00G002730 Citrullus lanatus HOM05D006831 ORTHO05D008256 4.9e-41 172.6 296 38.9
ClCG07G013280 Citrullus lanatus HOM05D006831 ORTHO05D008256 4.9e-41 172.6 296 38.9
CiPaw.01G232000 Carya illinoinensis HOM05D006831 ORTHO05D008256 6.4e-41 172.2 298 37.6
RcHm_v2.0_Chr2g0140341 Rosa chinensis HOM05D006831 ORTHO05D008256 8.3e-41 171.8 327 37.6
FAN02G3719 Fragaria x ananassa HOM05D006831 ORTHO05D008256 1.4e-40 171.0 323 36.8
Haze_06254 Corylus avellana HOM05D006831 ORTHO05D008256 3.2e-40 169.9 317 35.3
Actinidia21708 Actinidia chinensis HOM05D006831 ORTHO05D008256 4.1e-40 169.5 319 35.4
Cfa003655 Carpinus fangiana HOM05D006831 ORTHO05D008256 4.1e-40 169.5 320 35.0
QL05p020342 Quercus lobata HOM05D006831 ORTHO05D008256 4.1e-40 169.5 312 36.2
Phvul.010G145700 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 5.4e-40 169.1 318 36.5
Atru.chr1.3517 Acer truncatum HOM05D006831 ORTHO05D008256 7.1e-40 168.7 324 35.2
DCAR_016191 Daucus carota HOM05D006831 ORTHO05D008256 7.1e-40 168.7 308 37.0
Glyma.08G201400 Glycine max HOM05D006831 ORTHO05D008256 9.2e-40 168.3 318 36.2
TWI12G0407 Tripterygium wilfordii HOM05D006831 ORTHO05D008256 9.2e-40 168.3 340 34.1
FAN14G1280 Fragaria x ananassa HOM05D006831 ORTHO05D008256 1.2e-39 167.9 299 38.5
Glyma.07G015900 Glycine max HOM05D006831 ORTHO05D008256 1.6e-39 167.5 319 35.7
CSS0014632 Camellia sinensis var. sinensis HOM05D006831 ORTHO05D008256 2.7e-39 166.8 322 34.2
Eucgr.F03071 Eucalyptus grandis HOM05D006831 ORTHO05D008256 2.7e-39 166.8 323 33.4
VMungo0331G1511 Vigna mungo HOM05D006831 ORTHO05D008256 2.7e-39 166.8 328 36.0
Lalb_Chr04g0262951 Lupinus albus HOM05D006831 ORTHO05D008256 7.8e-39 165.2 321 36.1
Manes.11G034300 Manihot esculenta HOM05D006831 ORTHO05D008256 7.8e-39 165.2 280 38.2
Prupe.3G060100 Prunus persica HOM05D006831 ORTHO05D008256 7.8e-39 165.2 326 35.6
Lj3g0006655 Lotus japonicus HOM05D006831 ORTHO05D008256 1.3e-38 164.5 326 35.3
Lj5A54G57 Lonicera japonica HOM05D006831 ORTHO05D008256 2.3e-38 163.7 310 35.5
Cc04_g02630 Coffea canephora HOM05D006831 ORTHO05D008256 6.6e-38 162.2 312 34.3
CsaV3_3G023650 Cucumis sativus L. HOM05D006831 ORTHO05D008256 2.5e-37 160.2 309 37.2
Potri.001G189400 Populus trichocarpa HOM05D006831 ORTHO05D008256 3.3e-37 159.8 326 34.7
MD09G1204500 Malus domestica HOM05D006831 ORTHO05D008256 7.3e-37 158.7 327 36.4
PGR102G2866 Punica granatum HOM05D006831 ORTHO05D008256 9.6e-37 158.3 325 35.4
MSTRG.11030 Avicennia marina HOM05D006831 ORTHO05D008256 1.6e-36 157.5 332 32.8
CARHR074700 Cardamine hirsuta HOM05D006831 ORTHO05D008256 1.6e-36 157.5 128 66.4
Sabra01G0151300 Salix brachista HOM05D006831 ORTHO05D008256 1.6e-36 157.5 324 33.3
ECA247G2417 Erigeron canadensis HOM05D006831 ORTHO05D008256 2.8e-36 156.8 326 33.7
arahy.Tifrunner.gnm1.ann1.4LXS91 Arachis hypogaea HOM05D006831 ORTHO05D008256 4.7e-36 156.0 330 34.8
arahy.Tifrunner.gnm1.ann1.U3LBHC Arachis hypogaea HOM05D006831 ORTHO05D008256 4.7e-36 156.0 326 35.0
CAN.G1143.6 Capsicum annuum HOM05D006831 ORTHO05D008256 8.1e-36 155.2 309 33.7
Cpa.g.sc109.6 Carica papaya HOM05D006831 ORTHO05D008256 1.1e-35 154.8 279 38.4
Peaxi162Scf00038g00918 Petunia axillaris HOM05D006831 ORTHO05D008256 1.1e-35 154.8 304 34.2
TAR626G1633 Trochodendron aralioides HOM05D006831 ORTHO05D008256 1.1e-35 154.8 322 34.2
Lsat_1_v5_gn_1_36980 Lactuca sativa HOM05D006831 ORTHO05D008256 1.8e-35 154.1 334 34.1
Potri.011G047800 Populus trichocarpa HOM05D006831 ORTHO05D008256 2.4e-35 153.7 326 33.7
CiPaw.02G146100 Carya illinoinensis HOM05D006831 ORTHO05D008256 5.2e-35 152.5 320 34.7
AUR62031907 Chenopodium quinoa HOM05D006831 ORTHO05D008256 6.8e-35 152.1 297 34.3
Sabra11G0033200 Salix brachista HOM05D006831 ORTHO05D008256 8.9e-35 151.8 328 35.1
MBI04_g30107_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 4.4e-34 149.4 325 35.1
Nn6g35309 Nelumbo nucifera HOM05D006831 ORTHO05D008256 4.4e-34 149.4 330 33.0
PGSC0003DMG400002528 Solanum tuberosum HOM05D006831 ORTHO05D008256 4.4e-34 149.4 311 33.8
Sopen03g039800 Solanum pennellii HOM05D006831 ORTHO05D008256 7.6e-34 148.7 307 34.2
Solyc03g120970.3 Solanum lycopersicum HOM05D006831 ORTHO05D008256 1.7e-33 147.5 304 34.2
Oeu050599.1 Olea europaea HOM05D006831 ORTHO05D008256 2.9e-33 146.7 320 32.5
Ca_23268_v3 Cicer arietinum L. HOM05D006831 ORTHO05D008256 3.8e-33 146.4 309 34.0
Medtr8g014330 Medicago truncatula HOM05D006831 ORTHO05D008256 4.9e-33 146.0 334 32.3
TAR383G0884 Trochodendron aralioides HOM05D006831 ORTHO05D008256 8.4e-33 145.2 321 32.4
CANSAT56G0873 Cannabis sativa HOM05D006831 ORTHO05D008256 2.1e-31 140.6 335 32.2
Lsat_1_v5_gn_5_134400 Lactuca sativa HOM05D006831 ORTHO05D008256 3.5e-31 139.8 292 34.2
Psat4g221040 Pisum sativum HOM05D006831 ORTHO05D008256 6.0e-31 139.0 288 36.5
SalBow2G3477 Salvia bowleyana HOM05D006831 ORTHO05D008256 6.0e-31 139.0 282 33.0
AUR62022199 Chenopodium quinoa HOM05D006831 ORTHO05D008256 7.8e-31 138.7 288 33.7
TPR.G29201 Trifolium pratense HOM05D006831 ORTHO05D008256 7.8e-31 138.7 332 32.5
EL10Ac9g21213 Beta vulgaris HOM05D006831 ORTHO05D008256 1.3e-30 137.9 327 30.3
HanXRQChr02g0032201 Helianthus annuus HOM05D006831 ORTHO05D008256 1.3e-30 137.9 335 32.5
HanXRQChr10g0313251 Helianthus annuus HOM05D006831 ORTHO05D008256 1.3e-30 137.9 327 32.7
Phvul.005G166600 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 1.3e-30 137.9 306 32.7
Ah.01g022020 Amaranthus hybridus HOM05D006831 ORTHO05D008256 3.9e-30 136.3 285 34.0
Aqoxy7G01449 Aquilegia oxysepala HOM05D006831 ORTHO05D008256 1.3e-28 131.3 326 31.6
VMungo1080G0645 Vigna mungo HOM05D006831 ORTHO05D008256 1.6e-28 131.0 289 33.6
SGA_v2.0_scaffold66G22536 Striga asiatica HOM05D001613 ORTHO05D008256 2.6e-26 123.6 263 32.7
Nitab4.5_0012387g0010 Nicotiana tabacum HOM05D006831 ORTHO05D008256 1.3e-25 121.3 305 30.8
PSO210G4514 Papaver somniferum HOM05D006831 ORTHO05D008256 2.2e-25 120.6 363 28.7
PSO210G6112 Papaver somniferum HOM05D006831 ORTHO05D008256 1.9e-21 107.5 364 26.1
MELO3C012995.2 Cucumis melo HOM05D006831 ORTHO05D008256 3.6e-20 103.2 304 30.6
Actinidia32697 Actinidia chinensis HOM05D006831 ORTHO05D008256 1.8e-19 100.9 112 45.5
GSVIVG01017000001 Vitis vinifera HOM05D006831 ORTHO05D008256 1.2e-18 98.2 115 43.5
Os01g0744200 Oryza sativa ssp. japonica HOM05D006831 ORTHO05D008256 1.3e-17 94.7 309 27.8
Nitab4.5_0009505g0020 Nicotiana tabacum HOM05D006831 ORTHO05D008256 8.4e-17 92.0 90 47.8
VMungo0331G1726 Vigna mungo HOM05D006831 ORTHO05D008256 1.1e-16 91.7 208 31.2
Zm00001eb153550 Zea mays HOM05D006831 ORTHO05D008256 1.9e-16 90.9 307 28.0
Migut.I00901 Erythranthe guttata HOM05D006831 ORTHO05D008256 4.2e-16 89.7 113 41.6
HPP92_006371 Vanilla planifolia HOM05D006831 ORTHO05D008256 9.3e-16 88.6 317 27.1
ATR0705G209 Amborella trichopoda HOM05D006831 ORTHO05D008256 3.0e-14 83.6 101 42.6
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 5.6e-13 79.3 309 27.2
TPR.G25775 Trifolium pratense HOM05D006831 ORTHO05D008256 1.2e-10 71.6 75 48.0
Atru.chr8.2382 Acer truncatum HOM05D006353 ORTHO05D007993 2.6e-10 70.5 298 25.8
Dinv25324 Davidia involucrata HOM05D006353 ORTHO05D007993 2.6e-10 70.5 290 26.2
Lj1g0007888 Lotus japonicus HOM05D006353 ORTHO05D007993 4.5e-10 69.7 280 26.1
Haze_21157 Corylus avellana HOM05D006353 ORTHO05D007993 5.8e-10 69.3 274 26.3
Lalb_Chr19g0124031 Lupinus albus HOM05D006353 ORTHO05D007993 7.6e-10 68.9 302 26.2
Sabra04G0151900 Salix brachista HOM05D006353 ORTHO05D007993 7.6e-10 68.9 285 26.7
Hund00686 Selenicereus undatus HOM05D006831 ORTHO05D008256 1.3e-09 68.2 52 57.7
Medtr7g072635 Medicago truncatula HOM05D006353 ORTHO05D007993 2.9e-09 67.0 289 24.6
Medtr7g072870 Medicago truncatula HOM05D006353 ORTHO05D007993 2.9e-09 67.0 289 24.6
Sc07g0005810 Simmondsia chinensis HOM05D006353 ORTHO05D007993 3.8e-09 66.6 286 26.6
Thecc.04G154100 Theobroma cacao HOM05D006353 ORTHO05D007993 3.8e-09 66.6 288 27.8
GSVIVG01030203001 Vitis vinifera HOM05D006353 ORTHO05D007993 3.8e-09 66.6 281 27.0
Actinidia11518 Actinidia chinensis HOM05D006353 ORTHO05D007993 4.9e-09 66.2 294 25.5
EL10Ac7g17070 Beta vulgaris HOM05D006353 ORTHO05D007993 6.5e-09 65.9 307 25.4
vmacro20360 Vaccinium macrocarpon HOM05D006353 ORTHO05D007993 8.4e-09 65.5 279 27.6
PGSC0003DMG400004416 Solanum tuberosum HOM05D006353 ORTHO05D007993 1.1e-08 65.1 280 23.6
AUR62006369 Chenopodium quinoa HOM05D006353 ORTHO05D007993 1.4e-08 64.7 291 27.1
Migut.J00057 Erythranthe guttata HOM05D006353 ORTHO05D007993 1.4e-08 64.7 287 25.4
MSTRG.18951 Avicennia marina HOM05D006353 ORTHO05D007993 2.5e-08 63.9 274 24.1
Potri.016G134500 Populus trichocarpa HOM05D006353 ORTHO05D007993 3.2e-08 63.5 270 25.9
CiPaw.09G219300 Carya illinoinensis HOM05D006353 ORTHO05D007993 4.2e-08 63.2 287 24.0
Rhsim05G0229500 Rhododendron simsii HOM05D006353 ORTHO05D007993 4.2e-08 63.2 291 27.8
Haze_02695 Corylus avellana HOM05D006831 ORTHO05D008256 5.5e-08 62.8 52 53.8
QL07p032560 Quercus lobata HOM05D006353 ORTHO05D007993 5.5e-08 62.8 291 24.7
GSVIVG01032801001 Vitis vinifera HOM05D007537 ORTHO05D009602 7.1e-08 62.4 298 25.2
Sopen09g010850 Solanum pennellii HOM05D006353 ORTHO05D007993 9.3e-08 62.0 283 21.9
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 1.2e-07 61.6 300 26.7
Prupe.6G291400 Prunus persica HOM05D006353 ORTHO05D007993 1.2e-07 61.6 261 23.8
Sc15g0002090 Simmondsia chinensis HOM05D006831 ORTHO05D008256 1.2e-07 61.6 88 37.5
Ah.08g209640 Amaranthus hybridus HOM05D006353 ORTHO05D007993 2.1e-07 60.8 269 26.4
FAN09G0411 Fragaria x ananassa HOM05D006353 ORTHO05D007993 2.1e-07 60.8 247 26.3
FAN05G5674 Fragaria x ananassa HOM05D006353 ORTHO05D007993 3.5e-07 60.1 233 26.2
Cfa017056 Carpinus fangiana HOM05D006353 ORTHO05D007993 1.0e-06 58.5 279 26.2
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 1.3e-06 58.2 284 26.1
AUR62029702 Chenopodium quinoa HOM05D006353 ORTHO05D007993 1.3e-06 58.2 268 25.4
FAN05G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 3.9e-06 56.6 255 25.9
ECA248G0672 Erigeron canadensis HOM05D006353 ORTHO05D007993 5.1e-06 56.2 296 23.6
Ciclev10012094m.g Citrus clementina HOM05D006353 ORTHO05D007993 8.7e-06 55.5 299 25.4


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