Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p28150 Brassica napus HOM05D008602 ORTHO05D013475 1.3e-117 426.4 216 100.0
BolC6t37981H Brassica oleracea HOM05D008602 ORTHO05D013475 1.3e-117 426.4 216 100.0
BraA07t30237Z Brassica rapa HOM05D008602 ORTHO05D013475 1.4e-111 406.4 216 95.4
A07p25900 Brassica napus HOM05D008602 ORTHO05D013475 3.1e-111 405.2 216 94.9
Thhalv10006384m.g Eutrema salsugineum HOM05D008602 ORTHO05D013475 2.5e-92 342.4 217 81.6
AT3G62180 Arabidopsis thaliana HOM05D008602 ORTHO05D013475 5.5e-92 341.3 216 79.6
AL5G44930 Arabidopsis lyrata HOM05D008602 ORTHO05D013475 4.7e-91 338.2 216 79.2
BcaB02g07346 Brassica carinata HOM05D008602 ORTHO05D013475 3.4e-89 332.0 216 81.0
Sp5g01200 Schrenkiella parvula HOM05D008602 ORTHO05D013475 7.5e-89 330.9 219 79.5
A04p00700 Brassica napus HOM05D008602 ORTHO05D024467 2.2e-85 319.3 204 78.9
BraA04t15789Z Brassica rapa HOM05D008602 ORTHO05D024467 8.5e-85 317.4 204 78.4
CARHR172520 Cardamine hirsuta HOM05D008602 ORTHO05D013475 3.2e-84 315.5 218 74.8
BcaC02g10283 Brassica carinata HOM05D008602 ORTHO05D024467 7.2e-84 314.3 204 77.9
C04p30790 Brassica napus HOM05D008602 ORTHO05D024467 7.2e-84 314.3 204 77.9
BcaC07g40708 Brassica carinata HOM05D008602 ORTHO05D013475 2.7e-83 312.4 219 74.4
BolC4t24598H Brassica oleracea HOM05D008602 ORTHO05D024467 3.6e-83 312.0 204 77.5
BcaC07g40710 Brassica carinata HOM05D008602 ORTHO05D013475 6.8e-82 307.8 217 73.3
A09p54250 Brassica napus HOM05D008602 ORTHO05D013475 8.8e-82 307.4 217 72.8
BraA09t40837Z Brassica rapa HOM05D008602 ORTHO05D013475 8.8e-82 307.4 217 72.8
C08p37120 Brassica napus HOM05D008602 ORTHO05D013475 1.5e-81 306.6 217 72.8
BolC8t51290H Brassica oleracea HOM05D008602 ORTHO05D013475 5.7e-81 304.7 217 72.4
Carub.0005s2891 Capsella rubella HOM05D008602 ORTHO05D013475 5.4e-79 298.1 219 71.2
BcaB06g29463 Brassica carinata HOM05D008602 ORTHO05D012039 3.7e-64 248.8 219 61.6
Aa31LG1G28390 Aethionema arabicum HOM05D008602 ORTHO05D012039 6.4e-64 248.1 218 60.6
Aa31LG10G16140 Aethionema arabicum HOM05D000036 ORTHO05D000441 8.3e-64 247.7 198 65.7
A05p00750 Brassica napus HOM05D008602 ORTHO05D012039 4.1e-63 245.4 219 60.7
Sp4g29040 Schrenkiella parvula HOM05D008602 ORTHO05D012039 4.1e-63 245.4 219 59.8
BraA05t19079Z Brassica rapa HOM05D008602 ORTHO05D012039 2.0e-62 243.0 219 60.3
BcaC01g05047 Brassica carinata HOM05D008602 ORTHO05D012039 3.5e-62 242.3 217 59.9
C03p30770 Brassica napus HOM05D008602 ORTHO05D012039 3.5e-62 242.3 217 59.9
BolC3t15427H Brassica oleracea HOM05D008602 ORTHO05D012039 3.5e-62 242.3 217 59.9
A03p25830 Brassica napus HOM05D008602 ORTHO05D012039 4.6e-62 241.9 217 59.9
BraA03t11797Z Brassica rapa HOM05D008602 ORTHO05D012039 4.6e-62 241.9 217 59.9
AT2G47050 Arabidopsis thaliana HOM05D008602 ORTHO05D012039 1.3e-61 240.4 219 59.4
CARHR142410 Cardamine hirsuta HOM05D008602 ORTHO05D012039 1.3e-61 240.4 217 59.4
Thhalv10001629m.g Eutrema salsugineum HOM05D008602 ORTHO05D012039 1.3e-61 240.4 219 58.4
A04p34790 Brassica napus HOM05D008602 ORTHO05D012039 3.0e-61 239.2 217 59.4
BraA04t18934Z Brassica rapa HOM05D008602 ORTHO05D012039 3.0e-61 239.2 217 59.4
BcaC02g09027 Brassica carinata HOM05D008602 ORTHO05D012039 3.9e-61 238.8 219 58.9
C04p00910 Brassica napus HOM05D008602 ORTHO05D012039 3.9e-61 238.8 219 58.9
BolC4t21729H Brassica oleracea HOM05D008602 ORTHO05D012039 3.9e-61 238.8 219 58.9
C04p72560 Brassica napus HOM05D008602 ORTHO05D012039 8.6e-61 237.7 217 59.0
BolC4t28744H Brassica oleracea HOM05D008602 ORTHO05D012039 8.6e-61 237.7 217 59.0
AL4G46550 Arabidopsis lyrata HOM05D008602 ORTHO05D012039 1.1e-60 237.3 219 58.4
THA.LOC104827651 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 1.6e-59 233.4 229 57.6
Carub.0004s2979 Capsella rubella HOM05D008602 ORTHO05D012039 4.7e-59 231.9 219 56.6
THA.LOC104802122 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 2.3e-58 229.6 228 55.3
THA.LOC104817438 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 2.2e-56 223.0 227 54.6
BcaB02g08120 Brassica carinata HOM05D000703 ORTHO05D000633 1.1e-44 184.1 144 68.8
A09p54240 Brassica napus HOM05D000036 ORTHO05D000441 4.9e-16 89.0 172 32.0
BraA09t40836Z Brassica rapa HOM05D000036 ORTHO05D000441 4.9e-16 89.0 172 32.0
AT2G47040 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 8.4e-16 88.2 207 30.9
BolC8t51289H Brassica oleracea HOM05D000036 ORTHO05D000441 8.4e-16 88.2 172 32.6
BcaC07g40707 Brassica carinata HOM05D000036 ORTHO05D000441 1.1e-15 87.8 172 32.0
C08p37110 Brassica napus HOM05D000036 ORTHO05D000441 1.1e-15 87.8 172 32.0
Carub.0004s2978 Capsella rubella HOM05D000036 ORTHO05D000441 1.1e-15 87.8 202 30.2
Sp4g29030 Schrenkiella parvula HOM05D000036 ORTHO05D000441 1.1e-15 87.8 202 30.7
AL5G44920 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 1.9e-15 87.0 166 33.1
BcaB02g07347 Brassica carinata HOM05D000036 ORTHO05D000441 2.5e-15 86.7 166 33.1
BcaC02g10282 Brassica carinata HOM05D000036 ORTHO05D000441 2.5e-15 86.7 166 31.9
A04p00710 Brassica napus HOM05D000036 ORTHO05D000441 2.5e-15 86.7 166 31.9
C04p30810 Brassica napus HOM05D000036 ORTHO05D000441 2.5e-15 86.7 166 31.9
BolC4t24601H Brassica oleracea HOM05D000036 ORTHO05D000441 2.5e-15 86.7 166 31.9
BcaB02g08121 Brassica carinata HOM05D000036 ORTHO05D000441 3.2e-15 86.3 166 32.5
BcaB06g29464 Brassica carinata HOM05D000036 ORTHO05D000441 3.2e-15 86.3 169 32.0
A04p34780 Brassica napus HOM05D000036 ORTHO05D000441 3.2e-15 86.3 201 29.9
C04p72550 Brassica napus HOM05D000036 ORTHO05D000441 3.2e-15 86.3 201 29.9
BolC4t28743H Brassica oleracea HOM05D000036 ORTHO05D000441 3.2e-15 86.3 201 29.9
BraA04t18933Z Brassica rapa HOM05D000036 ORTHO05D000441 3.2e-15 86.3 201 29.9
Thhalv10005855m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 3.2e-15 86.3 166 31.9
Carub.0005s2890 Capsella rubella HOM05D000036 ORTHO05D000441 4.2e-15 85.9 168 31.5
CARHR172510 Cardamine hirsuta HOM05D000036 ORTHO05D000441 4.2e-15 85.9 177 31.6
BraA04t15791Z Brassica rapa HOM05D000036 ORTHO05D000441 5.5e-15 85.5 166 31.3
Thhalv10001369m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 7.1e-15 85.1 202 30.2
Sp5g01210 Schrenkiella parvula HOM05D000036 ORTHO05D000441 7.1e-15 85.1 166 31.9
AT3G62170 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 32.5
A07p25890 Brassica napus HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 31.9
C06p28140 Brassica napus HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 32.5
BolC6t37980H Brassica oleracea HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 32.5
BraA07t30236Z Brassica rapa HOM05D000036 ORTHO05D000441 1.2e-14 84.3 166 31.9
A05p00770 Brassica napus HOM05D000036 ORTHO05D000441 1.6e-14 84.0 201 29.4
BraA05t19080Z Brassica rapa HOM05D000036 ORTHO05D000441 1.6e-14 84.0 201 29.4
Carub.0004s2977 Capsella rubella HOM05D000036 ORTHO05D000441 6.0e-14 82.0 213 28.6
AT2G47030 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 1.0e-13 81.3 220 29.1
CARHR142400 Cardamine hirsuta HOM05D000036 ORTHO05D000441 8.7e-13 78.2 201 30.3
BcaB01g03192 Brassica carinata HOM05D000036 ORTHO05D000441 5.7e-12 75.5 207 28.5
AL4G46540 Arabidopsis lyrata HOM05D008602 ORTHO05D000441 7.4e-12 75.1 186 29.0
THA.LOC104817436 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 7.4e-12 75.1 168 30.4
BcaC01g05049 Brassica carinata HOM05D000036 ORTHO05D000441 1.6e-11 73.9 201 28.9
C03p30760 Brassica napus HOM05D000036 ORTHO05D000441 1.6e-11 73.9 201 28.9
A03p25820 Brassica napus HOM05D000036 ORTHO05D000441 2.1e-11 73.6 207 29.0
BraA03t11796Z Brassica rapa HOM05D000036 ORTHO05D000441 2.1e-11 73.6 207 29.0
C04p00930 Brassica napus HOM05D000036 ORTHO05D000441 2.8e-11 73.2 201 27.9
BolC3t15426H Brassica oleracea HOM05D000036 ORTHO05D000441 2.8e-11 73.2 201 28.9
BolC4t21731H Brassica oleracea HOM05D000036 ORTHO05D000441 2.8e-11 73.2 201 27.9
Cpa.g.sc41.94 Carica papaya HOM05D000036 ORTHO05D000441 1.8e-10 70.5 179 25.7
THA.LOC104802121 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 6.9e-10 68.6 197 27.9
Aa31LG1G28380 Aethionema arabicum HOM05D002601 ORTHO05D002884 2.9e-08 63.2 196 26.5
Gohir.A12G122500 Gossypium hirsutum HOM05D000036 ORTHO05D000441 2.7e-06 56.6 165 23.0
Gohir.D12G126200 Gossypium hirsutum HOM05D000036 ORTHO05D000441 2.7e-06 56.6 165 23.0
Gorai.008G137200 Gossypium raimondii HOM05D000036 ORTHO05D000441 2.7e-06 56.6 165 23.0
Manes.07G013500 Manihot esculenta HOM05D000036 ORTHO05D000441 2.7e-06 56.6 215 25.6


User provided reference genes

Program Settings