Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p27530 Brassica napus HOM05D003900 ORTHO05D005009 7.5e-261 904.0 763 100.0
BolC6t37920H Brassica oleracea HOM05D003900 ORTHO05D005009 9.9e-261 903.7 763 99.9
A07p25540 Brassica napus HOM05D003900 ORTHO05D005009 4.9e-244 848.2 763 94.4
BcaC08g45129 Brassica carinata HOM05D003900 ORTHO05D005009 9.3e-243 844.0 787 73.7
BcaB02g07375 Brassica carinata HOM05D003900 ORTHO05D005009 1.6e-223 780.0 764 91.5
BraA07t30195Z Brassica rapa HOM05D003900 ORTHO05D005009 9.7e-216 754.2 766 88.9
Thhalv10022571m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 2.2e-180 636.7 761 80.4
AL5G43880 Arabidopsis lyrata HOM05D003900 ORTHO05D005009 4.9e-159 565.8 439 72.7
CARHR171850 Cardamine hirsuta HOM05D003900 ORTHO05D005009 2.4e-158 563.5 439 70.4
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 2.7e-157 560.1 439 74.7
AT5G28370 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 7.3e-155 552.0 409 73.8
AT5G28460 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 7.3e-155 552.0 409 73.8
AT3G61520 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 1.4e-153 547.7 409 73.8
Aa31LG10G15460 Aethionema arabicum HOM05D003900 ORTHO05D005009 6.8e-137 492.3 757 74.0
Sp4g28170 Schrenkiella parvula HOM05D003900 ORTHO05D005009 1.7e-124 451.1 446 59.6
Thhalv10001319m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 1.4e-121 441.4 438 59.8
Aa31LG1G27520 Aethionema arabicum HOM05D003900 ORTHO05D005009 1.9e-118 431.0 445 61.8
THA.LOC104817316 Tarenaya hassleriana HOM05D003900 ORTHO05D005009 3.5e-117 426.8 411 61.6
Atru.chr5.581 Acer truncatum HOM05D003900 ORTHO05D005009 6.5e-79 299.7 394 48.0
Atru.chr5.563 Acer truncatum HOM05D003900 ORTHO05D005009 1.1e-78 298.9 394 47.7
Gohir.D12G110200 Gossypium hirsutum HOM05D003900 ORTHO05D005009 1.8e-76 291.6 444 47.1
Gorai.008G119500 Gossypium raimondii HOM05D003900 ORTHO05D005009 5.2e-76 290.0 444 46.8
Gohir.A12G106900 Gossypium hirsutum HOM05D003900 ORTHO05D005009 2.6e-75 287.7 416 45.2
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 2.0e-72 278.1 399 47.1
Thecc.01G352500 Theobroma cacao HOM05D003900 ORTHO05D005009 3.5e-72 277.3 382 45.5
Duzib138G1643 Durio zibethinus HOM05D003900 ORTHO05D005009 1.7e-71 275.0 419 45.6
CARHR141390 Cardamine hirsuta HOM05D003900 ORTHO05D005009 7.5e-67 259.6 254 54.3
Dinv43863 Davidia involucrata HOM05D003900 ORTHO05D005009 2.8e-66 257.7 373 42.9
Prupe.2G177500 Prunus persica HOM05D003900 ORTHO05D005009 4.8e-66 256.9 436 45.4
CiPaw.01G067500 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.8e-65 255.0 341 44.3
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.4e-65 253.4 346 43.4
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 5.4e-65 253.4 345 42.6
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 9.1e-65 252.7 327 44.3
CiPaw.01G067200 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.2e-64 252.3 341 42.5
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 1.2e-64 252.3 345 42.6
CiPaw.01G067300 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.6e-64 251.9 349 42.7
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 1.6e-64 251.9 350 42.9
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 2.0e-64 251.5 280 50.4
RcHm_v2.0_Chr7g0228211 Rosa chinensis HOM05D003900 ORTHO05D005009 2.7e-64 251.1 343 43.1
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 5.9e-64 250.0 377 41.6
MD07G1131300 Malus domestica HOM05D003900 ORTHO05D005009 1.3e-63 248.8 436 45.9
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 1.3e-63 248.8 353 44.2
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.7e-63 248.4 341 43.1
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 1.7e-63 248.4 364 40.9
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 3.8e-63 247.3 351 41.0
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 5.0e-63 246.9 344 41.3
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 6.5e-63 246.5 363 46.0
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 6.5e-63 246.5 363 46.0
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.5e-62 245.4 303 46.2
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 1.5e-62 245.4 339 43.4
Haze_15564 Corylus avellana HOM05D003900 ORTHO05D005009 1.9e-62 245.0 343 44.0
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 1.9e-62 245.0 369 40.9
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 2.5e-62 244.6 388 39.9
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 4.2e-62 243.8 344 40.7
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 5.5e-62 243.4 332 42.8
RcHm_v2.0_Chr1g0357681 Rosa chinensis HOM05D003900 ORTHO05D005009 1.6e-61 241.9 456 42.3
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 8.0e-61 239.6 300 45.7
Duzib133G1046 Durio zibethinus HOM05D003900 ORTHO05D005009 8.8e-60 236.1 411 41.6
vmacro13229 Vaccinium macrocarpon HOM05D003900 ORTHO05D005009 1.2e-59 235.7 360 42.2
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 2.6e-59 234.6 310 43.5
COL.COLO4_12777 Corchorus olitorius HOM05D003900 ORTHO05D005009 2.2e-58 231.5 332 45.2
Cc02_g38560 Coffea canephora HOM05D003900 ORTHO05D005009 8.3e-58 229.6 433 40.9
CAN.G78.130 Capsicum annuum HOM05D003900 ORTHO05D005009 1.8e-57 228.4 339 39.5
FvH4_7g15360 Fragaria vesca HOM05D003900 ORTHO05D005009 3.1e-57 227.6 310 43.2
FAN10G3614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 4.1e-57 227.3 310 42.9
FvH4_5g32150 Fragaria vesca HOM05D003900 ORTHO05D005009 5.4e-57 226.9 321 39.9
FvH4_5g03011 Fragaria vesca HOM05D003900 ORTHO05D005009 9.2e-57 226.1 353 38.0
Peaxi162Scf00020g00155 Petunia axillaris HOM05D003900 ORTHO05D005009 9.2e-57 226.1 348 38.5
Nn1g01685 Nelumbo nucifera HOM05D003900 ORTHO05D005009 2.9e-55 221.1 284 42.6
FAN04G0755 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.6e-55 219.5 289 42.2
AUR62004412 Chenopodium quinoa HOM05D003900 ORTHO05D005009 1.1e-54 219.2 362 38.4
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 1.9e-54 218.4 372 38.7
EL10Ac1g00355 Beta vulgaris HOM05D003900 ORTHO05D005009 7.3e-54 216.5 367 42.5
Eucgr.E00097 Eucalyptus grandis HOM05D003900 ORTHO05D005009 2.8e-53 214.5 377 36.9
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 8.0e-53 213.0 341 39.3
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.0e-53 213.0 301 41.2
SGA_v2.0_scaffold4G02283 Striga asiatica HOM05D003900 ORTHO05D005009 4.0e-52 210.7 340 38.2
VMungo0251G1173 Vigna mungo HOM05D003900 ORTHO05D005009 4.0e-52 210.7 342 37.4
MD01G1071400 Malus domestica HOM05D003900 ORTHO05D005009 2.0e-51 208.4 301 52.8
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.7e-50 205.3 258 45.0
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 1.7e-50 205.3 368 38.3
Lalb_Chr04g0259301 Lupinus albus HOM05D003900 ORTHO05D005009 1.7e-50 205.3 314 41.4
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 2.2e-50 204.9 341 37.0
FAN06G2614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.3e-50 203.0 338 37.6
Ah.15g096610 Amaranthus hybridus HOM05D003900 ORTHO05D005009 1.1e-49 202.6 315 38.7
Glyma.16G031800 Glycine max HOM05D003900 ORTHO05D005009 1.8e-49 201.8 359 38.2
AUR62022618 Chenopodium quinoa HOM05D003900 ORTHO05D005009 4.1e-49 200.7 358 36.6
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 4.1e-49 200.7 318 38.4
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 7.8e-48 196.4 344 36.3
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 1.3e-47 195.7 338 38.2
arahy.Tifrunner.gnm1.ann1.U9H0N8 Arachis hypogaea HOM05D003900 ORTHO05D005009 1.7e-47 195.3 370 35.7
FAN06G4981 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.7e-47 195.3 310 39.0
Lj4g0005982 Lotus japonicus HOM05D003900 ORTHO05D005009 3.9e-47 194.1 354 37.9
Ciclev10019067m.g Citrus clementina HOM05D003900 ORTHO05D005009 3.3e-46 191.0 351 37.0
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 4.3e-46 190.7 210 46.2
arahy.Tifrunner.gnm1.ann1.K45FBX Arachis hypogaea HOM05D003900 ORTHO05D005009 7.3e-46 189.9 370 35.1
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 3.6e-45 187.6 210 46.2
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 4.7e-45 187.2 210 47.1
Actinidia20162 Actinidia chinensis HOM05D003900 ORTHO05D005009 8.0e-45 186.4 203 49.8
MBI11_g19575_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 1.4e-44 185.7 388 39.4
MELO3C029134.2 Cucumis melo HOM05D003900 ORTHO05D005009 5.8e-43 180.3 217 44.7
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 2.2e-42 178.3 189 49.7
FAN10G1060 Fragaria x ananassa HOM05D003900 ORTHO05D005009 7.0e-41 173.3 310 36.8
RcHm_v2.0_Chr3g0468501 Rosa chinensis HOM05D003900 ORTHO05D005009 1.0e-39 169.5 306 36.9
Cfa003873 Carpinus fangiana HOM05D003900 ORTHO05D005009 3.3e-38 164.5 362 34.0
DCAR_025213 Daucus carota HOM05D003900 ORTHO05D005009 4.3e-38 164.1 400 37.0
ECA236G1505 Erigeron canadensis HOM05D003900 ORTHO05D005009 4.7e-37 160.6 215 43.3
PSO266G0010 Papaver somniferum HOM05D003900 ORTHO05D005009 5.2e-36 157.1 225 35.6
Medtr8g098755 Medicago truncatula HOM05D003900 ORTHO05D005009 6.8e-36 156.8 196 41.8
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 6.8e-36 156.8 277 35.7
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 5.8e-35 153.7 203 43.3
Psat7g005640 Pisum sativum HOM05D003900 ORTHO05D005009 7.5e-35 153.3 196 41.3
Aqoxy7G01955 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 6.4e-34 150.2 464 27.8
RcHm_v2.0_Chr5g0017031 Rosa chinensis HOM05D003900 ORTHO05D005009 8.3e-34 149.8 152 51.3
PSO384G0446 Papaver somniferum HOM05D003900 ORTHO05D005009 1.9e-33 148.7 263 32.3
CDE10G0308 Ceratophyllum demersum HOM05D003834 ORTHO05D004483 2.7e-32 144.8 273 32.2
ATR0721G158 Amborella trichopoda HOM05D003900 ORTHO05D005009 6.8e-28 130.2 237 35.4
FAN18G4460 Fragaria x ananassa HOM05D003900 ORTHO05D005009 6.4e-26 123.6 216 34.3
CARHR141380 Cardamine hirsuta HOM05D003900 ORTHO05D005009 3.5e-24 117.9 152 56.6
Ca_17228_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005009 7.8e-24 116.7 207 34.8
MBI11_g19576_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 7.8e-24 116.7 257 30.0
HPP92_011504 Vanilla planifolia HOM05D003900 ORTHO05D005009 1.3e-23 115.9 336 28.9
FAN18G1403 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.9e-20 103.2 97 49.5
Medtr3g088810 Medicago truncatula HOM05D003900 ORTHO05D005009 2.0e-19 102.1 123 43.1
CAN.G853.45 Capsicum annuum HOM05D003900 ORTHO05D005009 2.6e-19 101.7 155 38.7
VMungo0251G0997 Vigna mungo HOM05D003900 ORTHO05D005009 1.1e-17 96.3 165 34.5
RcHm_v2.0_Chr7g0228291 Rosa chinensis HOM05D003900 ORTHO05D005009 2.4e-17 95.1 87 55.2
CAN.G874.71 Capsicum annuum HOM05D003900 ORTHO05D005009 9.3e-17 93.2 116 41.4
CAN.G430.2 Capsicum annuum HOM05D003900 ORTHO05D005009 3.6e-13 81.3 123 41.5
Aqoxy4G00899 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 3.4e-11 74.7 184 32.6
CAN.G460.4 Capsicum annuum HOM05D003900 ORTHO05D005009 1.3e-10 72.8 101 41.6
CAN.G1005.1 Capsicum annuum HOM05D003900 ORTHO05D005009 2.9e-10 71.6 112 39.3
SEGI_18390 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 4.9e-10 70.9 206 25.7
SEGI_08205 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 5.4e-09 67.4 86 38.4
SEGI_36720 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 9.3e-09 66.6 175 30.3
Atru.BG.208.p Acer truncatum HOM05D000424 ORTHO05D000355 1.0e-07 63.2 247 23.1
SEGI_03438 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 1.8e-07 62.4 92 35.9
Aqoxy2G02642 Aquilegia oxysepala HOM05D003900 ORTHO05D016547 2.3e-07 62.0 105 34.3
Cc02_g34450 Coffea canephora HOM05D000162 ORTHO05D000090 3.0e-07 61.6 158 30.4
CAN.G609.3 Capsicum annuum HOM05D003900 ORTHO05D005009 6.7e-07 60.5 56 55.4
Glyma.14G039600 Glycine max HOM05D004783 ORTHO05D005581 6.7e-07 60.5 178 25.8
SEGI_28461 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.7e-07 60.5 89 34.8
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 8.7e-07 60.1 91 38.5
Nitab4.5_0006134g0060 Nicotiana tabacum HOM05D000424 ORTHO05D000355 8.7e-07 60.1 185 23.8
Zm00001eb280170 Zea mays HOM05D003900 ORTHO05D005009 8.7e-07 60.1 65 47.7
FAN08G3007 Fragaria x ananassa HOM05D003900 ORTHO05D005009 2.5e-06 58.5 45 55.6
Gohir.D08G154250 Gossypium hirsutum HOM05D003900 ORTHO05D005009 2.5e-06 58.5 93 46.2
Medtr2g100200 Medicago truncatula HOM05D006218 ORTHO05D007338 2.5e-06 58.5 179 29.1
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 5.6e-06 57.4 156 23.1
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 5.6e-06 57.4 124 24.2
Aqoxy4G00696 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 9.6e-06 56.6 176 29.0
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 9.6e-06 56.6 147 27.9
Phvul.008G205300 Phaseolus vulgaris HOM05D004783 ORTHO05D005581 9.6e-06 56.6 178 24.2


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