Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p27230 Brassica napus HOM05D007747 ORTHO05D009997 1.1e-36 156.0 73 100.0
BcaC08g45110 Brassica carinata HOM05D007747 ORTHO05D009997 2.2e-32 141.7 65 100.0
C06p27200 Brassica napus HOM05D007747 ORTHO05D009997 2.2e-32 141.7 65 100.0
A07p25360 Brassica napus HOM05D007747 ORTHO05D009997 2.4e-31 138.3 65 98.5
BraA07t30181Z Brassica rapa HOM05D007747 ORTHO05D009997 2.4e-31 138.3 65 98.5
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 1.6e-22 109.0 66 75.8
BcaB02g08951 Brassica carinata HOM05D007747 ORTHO05D009997 4.7e-19 97.4 66 71.2
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 8.0e-19 96.7 66 66.7
BolC4t22310H Brassica oleracea HOM05D007747 ORTHO05D009997 1.2e-17 92.8 66 68.2
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-17 92.4 66 63.6
A05p05960 Brassica napus HOM05D007747 ORTHO05D009997 1.7e-16 89.0 66 66.7
BraA05t19559Z Brassica rapa HOM05D007747 ORTHO05D009997 1.7e-16 89.0 66 66.7
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 4.9e-16 87.4 68 58.8
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 6.3e-16 87.0 68 58.8
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 5.4e-15 84.0 70 51.4
BraA07t30680Z Brassica rapa HOM05D007747 ORTHO05D009997 1.7e-13 79.0 64 59.4
A07p30430 Brassica napus HOM05D007747 ORTHO05D009997 8.6e-13 76.6 76 51.3
C06p27260 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-12 75.9 65 58.5
BolC6t37896H Brassica oleracea HOM05D007747 ORTHO05D009997 1.5e-12 75.9 65 58.5
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 3.3e-12 74.7 64 56.2
A07p25370 Brassica napus HOM05D007747 ORTHO05D009997 3.3e-12 74.7 65 56.9
A07p25380 Brassica napus HOM05D007747 ORTHO05D009997 3.3e-12 74.7 65 56.9
BraA07t30182Z Brassica rapa HOM05D007747 ORTHO05D009997 3.3e-12 74.7 65 56.9
BcaC02g12161 Brassica carinata HOM05D007747 ORTHO05D009997 4.3e-12 74.3 52 63.5
Carub.0002s0802 Capsella rubella HOM05D007747 ORTHO05D009997 4.3e-12 74.3 72 52.8
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 9.5e-12 73.2 59 57.6
BolC6t37892H Brassica oleracea HOM05D007747 ORTHO05D009997 1.2e-11 72.8 66 57.6
BraA07t30180Z Brassica rapa HOM05D007747 ORTHO05D009997 1.2e-11 72.8 66 59.1
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.6e-11 72.4 59 55.9
AL2G27660 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.1e-11 72.0 71 49.3
C06p27210 Brassica napus HOM05D007747 ORTHO05D009997 2.1e-11 72.0 65 56.9
C06p27220 Brassica napus HOM05D007747 ORTHO05D009997 2.1e-11 72.0 65 56.9
C06p27240 Brassica napus HOM05D007747 ORTHO05D009997 2.1e-11 72.0 65 56.9
A04p01260 Brassica napus HOM05D007747 ORTHO05D028248 2.8e-11 71.6 64 56.2
BraA04t15845Z Brassica rapa HOM05D007747 ORTHO05D028248 2.8e-11 71.6 64 56.2
C04p31610 Brassica napus HOM05D007747 ORTHO05D028248 1.0e-10 69.7 64 54.7
C06p27250 Brassica napus HOM05D007747 ORTHO05D009997 1.0e-10 69.7 65 55.4
BolC4t24708H Brassica oleracea HOM05D007747 ORTHO05D028248 1.0e-10 69.7 64 54.7
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 1.8e-10 68.9 66 42.4
BraA07t30179Z Brassica rapa HOM05D007747 ORTHO05D009997 1.8e-10 68.9 57 61.4
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 4.0e-10 67.8 66 42.4
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 4.0e-10 67.8 66 42.4
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 8.9e-10 66.6 64 46.9
C04p06880 Brassica napus HOM05D007747 ORTHO05D009997 2.0e-09 65.5 46 60.9
AT3G20997 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 5.8e-09 63.9 63 50.8
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 7.5e-09 63.5 75 45.3
AT3G20993 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 7.5e-09 63.5 70 48.6
AL807U10010 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 9.8e-09 63.2 63 50.8
BolC8t51184H Brassica oleracea HOM05D007747 ORTHO05D009997 9.8e-09 63.2 47 51.1
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.2e-08 62.0 59 52.5
BcaB06g28203 Brassica carinata HOM05D007747 ORTHO05D024130 2.2e-08 62.0 72 45.8
Carub.0002s0801 Capsella rubella HOM05D007747 ORTHO05D009997 2.2e-08 62.0 48 58.3
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 2.2e-08 62.0 59 47.5
BcaB03g15568 Brassica carinata HOM05D007747 ORTHO05D009997 2.9e-08 61.6 64 43.8
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 2.9e-08 61.6 64 42.2
Carub.0002s1314 Capsella rubella HOM05D007747 ORTHO05D009997 2.9e-08 61.6 70 47.1
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 3.7e-08 61.2 48 54.2
Carub.0001s3631 Capsella rubella HOM05D007747 ORTHO05D014853 6.4e-08 60.5 73 47.9
A07p18970 Brassica napus HOM05D007747 ORTHO05D024130 8.3e-08 60.1 63 47.6
A07p30900 Brassica napus HOM05D007747 ORTHO05D009997 8.3e-08 60.1 64 40.6
BraA07t29602Z Brassica rapa HOM05D007747 ORTHO05D024130 8.3e-08 60.1 63 47.6
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 8.3e-08 60.1 65 47.7
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 1.1e-07 59.7 64 40.6
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 1.1e-07 59.7 64 40.6
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.4e-07 59.3 64 43.8
Carub.0001s1284 Capsella rubella HOM05D007747 ORTHO05D009997 1.9e-07 58.9 66 48.5
Thhalv10017941m.g Eutrema salsugineum HOM05D007747 ORTHO05D014853 1.9e-07 58.9 67 41.8
C06p35910 Brassica napus HOM05D007747 ORTHO05D009997 2.4e-07 58.5 64 46.9
A07p30920 Brassica napus HOM05D007747 ORTHO05D009997 3.2e-07 58.2 64 46.9
BolC4t23792H Brassica oleracea HOM05D007747 ORTHO05D024130 4.1e-07 57.8 63 46.0
C04p22980 Brassica napus HOM05D007747 ORTHO05D024130 7.0e-07 57.0 63 46.0
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 9.2e-07 56.6 64 40.6
C06p27180 Brassica napus HOM05D007747 ORTHO05D009997 3.5e-06 54.7 48 50.0
Carub.0005s0920 Capsella rubella HOM05D007747 ORTHO05D009997 3.5e-06 54.7 63 42.9
Carub.0005s2785 Capsella rubella HOM05D007747 ORTHO05D014853 3.5e-06 54.7 70 44.3


User provided reference genes

Program Settings