Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p27210 Brassica napus HOM05D007747 ORTHO05D009997 7.8e-35 149.8 71 100.0
C06p27220 Brassica napus HOM05D007747 ORTHO05D009997 7.8e-35 149.8 71 100.0
C06p27240 Brassica napus HOM05D007747 ORTHO05D009997 2.3e-34 148.3 71 98.6
C06p27250 Brassica napus HOM05D007747 ORTHO05D009997 1.1e-33 146.0 71 97.2
BolC6t37896H Brassica oleracea HOM05D007747 ORTHO05D009997 2.5e-33 144.8 71 97.2
C06p27260 Brassica napus HOM05D007747 ORTHO05D009997 7.3e-33 143.3 71 95.8
A07p25370 Brassica napus HOM05D007747 ORTHO05D009997 9.5e-33 142.9 71 95.8
A07p25380 Brassica napus HOM05D007747 ORTHO05D009997 9.5e-33 142.9 71 95.8
BraA07t30182Z Brassica rapa HOM05D007747 ORTHO05D009997 9.5e-33 142.9 71 95.8
BraA07t30179Z Brassica rapa HOM05D007747 ORTHO05D009997 8.9e-23 109.8 56 94.6
BraA07t30180Z Brassica rapa HOM05D007747 ORTHO05D009997 3.7e-21 104.4 72 72.2
BolC6t37892H Brassica oleracea HOM05D007747 ORTHO05D009997 3.2e-20 101.3 72 68.1
C06p27180 Brassica napus HOM05D007747 ORTHO05D009997 7.5e-14 80.1 56 62.5
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 2.2e-13 78.6 74 58.1
BcaC08g45110 Brassica carinata HOM05D007747 ORTHO05D009997 2.9e-13 78.2 74 58.1
C06p27200 Brassica napus HOM05D007747 ORTHO05D009997 2.9e-13 78.2 74 58.1
A07p25360 Brassica napus HOM05D007747 ORTHO05D009997 4.9e-13 77.4 74 58.1
BraA07t30181Z Brassica rapa HOM05D007747 ORTHO05D009997 4.9e-13 77.4 74 58.1
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 8.3e-13 76.6 74 55.4
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 1.2e-11 72.8 72 54.2
BcaB02g08951 Brassica carinata HOM05D007747 ORTHO05D009997 2.1e-11 72.0 74 56.8
BolC4t22310H Brassica oleracea HOM05D007747 ORTHO05D009997 2.1e-11 72.0 74 56.8
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 3.5e-11 71.2 72 54.2
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 4.6e-11 70.9 72 54.2
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 4.6e-11 70.9 71 50.7
A05p05960 Brassica napus HOM05D007747 ORTHO05D009997 6.0e-11 70.5 74 55.4
BraA05t19559Z Brassica rapa HOM05D007747 ORTHO05D009997 6.0e-11 70.5 74 55.4
C06p27230 Brassica napus HOM05D007747 ORTHO05D009997 7.8e-11 70.1 65 56.9
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 1.7e-10 68.9 71 49.3
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 1.7e-10 68.9 71 49.3
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 5.1e-10 67.4 71 47.9
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 8.6e-10 66.6 76 50.0
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 8.6e-10 66.6 78 47.4
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.5e-09 65.1 77 45.5
Carub.0002s0802 Capsella rubella HOM05D007747 ORTHO05D009997 2.5e-09 65.1 75 48.0
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 2.5e-09 65.1 76 46.1
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 9.5e-09 63.2 76 46.1
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.2e-08 62.8 77 46.8
AL2G27660 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 4.7e-08 60.8 73 47.9
A04p01260 Brassica napus HOM05D007747 ORTHO05D028248 8.1e-08 60.1 78 44.9
BraA04t15845Z Brassica rapa HOM05D007747 ORTHO05D028248 8.1e-08 60.1 78 44.9
BraA07t30680Z Brassica rapa HOM05D007747 ORTHO05D009997 8.1e-08 60.1 80 45.0
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.4e-07 58.5 73 47.9
C04p31610 Brassica napus HOM05D007747 ORTHO05D028248 3.1e-07 58.2 78 43.6
BolC4t24708H Brassica oleracea HOM05D007747 ORTHO05D028248 3.1e-07 58.2 78 43.6
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 4.0e-07 57.8 74 43.2
Carub.0001s1284 Capsella rubella HOM05D007747 ORTHO05D009997 5.2e-07 57.4 74 44.6
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 6.8e-07 57.0 74 40.5
AL5G43440 Arabidopsis lyrata HOM05D007747 ORTHO05D014853 8.9e-07 56.6 74 47.3
A07p30430 Brassica napus HOM05D007747 ORTHO05D009997 8.9e-07 56.6 80 42.5
Carub.0002s1314 Capsella rubella HOM05D007747 ORTHO05D009997 1.5e-06 55.8 76 44.7
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.5e-06 55.8 76 43.4
A07p30900 Brassica napus HOM05D007747 ORTHO05D009997 2.0e-06 55.5 74 39.2
AT3G20993 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 2.6e-06 55.1 76 47.4
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 2.6e-06 55.1 74 39.2
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 2.6e-06 55.1 74 39.2
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.6e-06 55.1 76 42.1
AT3G61182 Arabidopsis thaliana HOM05D007747 ORTHO05D014853 7.6e-06 53.5 77 44.2
Thhalv10017941m.g Eutrema salsugineum HOM05D007747 ORTHO05D014853 9.9e-06 53.1 72 38.9


User provided reference genes

Program Settings