Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 2.2e-196 688.7 334 100.0
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 2.2e-196 688.7 334 100.0
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 5.2e-190 667.5 334 96.4
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 6.8e-190 667.2 334 97.9
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 7.0e-187 657.1 334 94.6
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 8.6e-177 623.6 331 92.4
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 2.6e-173 612.1 331 89.7
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.3e-169 599.7 332 88.3
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 3.0e-169 598.6 331 88.8
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.9e-168 595.9 332 88.3
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 9.6e-168 593.6 331 87.6
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 2.9e-164 582.0 331 86.1
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.3e-159 566.6 332 83.1
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.7e-154 548.9 329 80.5
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 9.3e-147 523.9 335 75.8
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.6e-146 521.5 328 77.1
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.5e-144 515.8 342 74.0
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 5.6e-144 514.6 321 77.9
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 5.6e-144 514.6 329 76.0
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.4e-144 514.2 331 75.5
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 9.6e-144 513.8 332 75.6
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 1.3e-143 513.5 334 74.6
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.6e-143 513.1 337 74.2
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.6e-143 513.1 337 74.2
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.6e-143 513.1 337 74.2
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 6.2e-143 511.1 329 76.0
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 8.1e-143 510.8 338 74.0
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 8.1e-143 510.8 337 73.6
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.1e-142 510.4 305 78.7
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 1.8e-142 509.6 333 75.1
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 2.4e-142 509.2 317 77.0
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-142 509.2 337 73.6
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-142 509.2 337 73.9
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 3.1e-142 508.8 314 77.4
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 4.0e-142 508.4 307 78.8
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 4.0e-142 508.4 332 74.4
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 6.9e-142 507.7 333 74.5
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 6.9e-142 507.7 306 78.4
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 9.0e-142 507.3 314 76.1
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.2e-141 506.9 302 79.1
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.2e-141 506.9 307 79.5
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.5e-141 506.5 329 74.2
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.5e-141 506.5 319 77.1
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.6e-141 505.8 334 72.8
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 3.4e-141 505.4 335 73.4
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 5.8e-141 504.6 302 80.5
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.3e-140 503.4 333 72.4
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.3e-140 503.4 331 73.1
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.3e-140 503.4 336 72.6
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.7e-140 503.1 329 74.5
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 2.9e-140 502.3 310 76.8
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 3.8e-140 501.9 330 74.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 3.8e-140 501.9 330 73.3
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 4.9e-140 501.5 329 74.2
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 6.5e-140 501.1 328 74.4
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 6.5e-140 501.1 310 77.1
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.1e-139 500.4 329 73.6
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.4e-139 500.0 338 73.4
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 1.9e-139 499.6 334 73.1
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.9e-139 499.6 329 73.3
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.5e-139 499.2 334 73.4
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 4.2e-139 498.4 325 74.2
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.2e-139 498.4 329 73.9
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 9.3e-139 497.3 335 73.1
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 9.3e-139 497.3 329 72.9
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.6e-138 496.5 309 77.3
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 1.6e-138 496.5 334 72.5
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 2.7e-138 495.7 309 76.7
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.9e-137 491.9 333 72.7
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 5.1e-137 491.5 306 75.8
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 3.7e-135 485.3 305 75.4
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.1e-134 483.8 333 71.8
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.8e-134 483.0 337 69.4
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 2.6e-133 479.2 345 69.6
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 2.2e-132 476.1 302 74.8
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.7e-130 469.2 305 72.1
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 2.7e-130 469.2 365 66.0
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 1.1e-126 457.2 311 69.8
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 3.3e-120 435.6 285 74.0
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 3.1e-118 429.1 328 66.8
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 3.8e-116 422.2 335 60.9
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 6.5e-116 421.4 259 76.8
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.5e-115 419.5 285 71.6
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 3.2e-115 419.1 280 72.1
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 6.1e-114 414.8 311 64.6
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 7.9e-114 414.5 272 73.9
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.4e-113 413.7 269 72.5
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.8e-113 413.3 270 74.4
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 3.9e-113 412.1 281 72.6
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 6.7e-113 411.4 248 79.4
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.5e-112 410.2 248 78.6
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 3.7e-111 405.6 248 77.4
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 2.9e-108 396.0 338 59.2
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.5e-107 392.9 298 63.1
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 7.2e-107 391.3 299 61.9
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 5.3e-102 375.2 257 71.2
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 4.7e-98 362.1 251 71.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.8e-94 350.1 204 78.9
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 4.2e-91 339.0 207 76.8
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.0e-88 330.1 182 82.4
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 6.3e-87 325.1 252 63.5
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 6.6e-84 315.1 245 64.9
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 1.2e-69 267.7 328 45.4
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 4.7e-66 255.8 177 68.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 7.5e-64 248.4 259 49.4
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 1.1e-62 244.6 210 62.4
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 9.9e-56 221.5 145 77.2
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.3e-55 221.1 205 58.0
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 1.9e-54 217.2 297 40.1
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.4e-54 216.9 171 64.3
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 4.8e-42 176.0 284 36.6
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.4e-41 173.7 187 56.1
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 9.0e-41 171.8 283 38.2
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 1.2e-40 171.4 167 58.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.8e-36 157.5 129 63.6
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 7.4e-35 152.1 332 30.4
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.6e-29 134.4 282 32.6
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 4.5e-24 116.3 163 40.5
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.9e-19 100.9 62 74.2
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.8e-17 94.4 78 59.0
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 4.3e-11 73.2 64 62.5
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.6e-10 71.2 54 55.6
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.6e-08 63.9 41 70.7
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.6e-08 63.9 42 73.8
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 9.4e-06 55.5 25 88.0


User provided reference genes

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