Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p26610 Brassica napus HOM05D001224 ORTHO05D041603 1.8e-66 255.8 124 100.0
C05p37770 Brassica napus HOM05D000675 ORTHO05D000395 8.2e-24 114.0 140 55.0
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-23 113.2 57 98.2
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-23 113.2 57 98.2
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-23 113.2 57 98.2
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 1.4e-23 113.2 57 98.2
BolC7t41308H Brassica oleracea HOM05D000675 ORTHO05D000395 1.4e-23 113.2 57 98.2
C05p45370 Brassica napus HOM05D000675 ORTHO05D000395 1.8e-23 112.8 57 96.5
BraA01t02479Z Brassica rapa HOM05D000675 ORTHO05D000395 4.1e-23 111.7 140 53.6
BolC1t04758H Brassica oleracea HOM05D000675 ORTHO05D000395 5.3e-23 111.3 57 96.5
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 9.1e-23 110.5 57 94.7
C04p35160 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-22 110.2 57 96.5
C05p42010 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-22 110.2 57 96.5
BolC5t33259H Brassica oleracea HOM05D000675 ORTHO05D000395 1.6e-22 109.8 57 96.5
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 2.7e-22 109.0 57 93.0
BraA07t28367Z Brassica rapa HOM05D000675 ORTHO05D000395 3.5e-22 108.6 57 94.7
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 1.3e-21 106.7 57 93.0
A07p05870 Brassica napus HOM05D000675 ORTHO05D000395 2.2e-21 105.9 57 93.0
BraA06t25345Z Brassica rapa HOM05D000675 ORTHO05D000395 2.9e-21 105.5 140 52.1
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 8.5e-21 104.0 57 89.5
BcaC05g27629 Brassica carinata HOM05D001224 ORTHO05D010571 7.5e-17 90.9 47 95.7
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 3.7e-16 88.6 57 80.7
C05p42060 Brassica napus HOM05D002776 ORTHO05D000395 1.8e-15 86.3 50 86.0
BolC4t25342H Brassica oleracea HOM05D001224 ORTHO05D041603 2.4e-15 85.9 47 93.6
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 1.3e-13 80.1 67 62.7
C05p18370 Brassica napus HOM05D001224 ORTHO05D042117 1.3e-13 80.1 41 95.1
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 1.3e-13 80.1 41 95.1
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 2.2e-13 79.3 57 70.2
C04p20840 Brassica napus HOM05D000675 ORTHO05D012331 2.9e-13 79.0 57 68.4
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 3.8e-13 78.6 67 61.2
BolC3t18754H Brassica oleracea HOM05D002776 ORTHO05D000395 3.8e-13 78.6 67 61.2
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 3.8e-13 78.6 67 61.2
BolC4t23614H Brassica oleracea HOM05D000675 ORTHO05D012331 8.5e-13 77.4 57 66.7
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-12 77.0 67 58.2
C07p06250 Brassica napus HOM05D000675 ORTHO05D000395 9.4e-12 73.9 57 66.7
BolC7t41043H Brassica oleracea HOM05D000675 ORTHO05D000395 3.6e-11 72.0 57 64.9
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 6.3e-08 61.2 45 68.9
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 7.0e-07 57.8 45 66.7
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 1.6e-06 56.6 56 57.1
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 2.0e-06 56.2 56 57.1
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 2.7e-06 55.8 56 57.1
A09p33410 Brassica napus HOM05D002776 ORTHO05D000395 2.7e-06 55.8 56 55.4
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 4.5e-06 55.1 56 55.4
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 53.6
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 55.4
BcaC08g43736 Brassica carinata HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 55.4
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 55.4
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
A01p26320 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 55.4
C04p21360 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 55.4
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
C06p23340 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
C08p17870 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 5.9e-06 54.7 56 55.4
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 5.9e-06 54.7 56 55.4
BolC6t37507H Brassica oleracea HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 5.9e-06 54.7 56 55.4
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 5.9e-06 54.7 56 55.4
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 7.7e-06 54.3 56 53.6
BolC6t36242H Brassica oleracea HOM05D002776 ORTHO05D000395 7.7e-06 54.3 56 55.4


User provided reference genes

Program Settings