Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 2.7e-133 478.8 259 100.0
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 3.8e-132 474.9 259 99.2
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.9e-131 472.6 259 98.5
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 3.8e-124 448.4 261 95.0
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 7.3e-123 444.1 260 95.4
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 1.0e-116 423.7 259 87.3
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 5.8e-112 407.9 263 85.2
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 3.2e-110 402.1 260 82.7
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-109 400.2 260 84.6
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 1.2e-109 400.2 260 84.6
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 1.2e-109 400.2 260 84.6
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.0e-108 397.1 263 86.3
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 3.0e-108 395.6 260 82.3
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.7e-103 379.8 261 80.5
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 6.2e-98 361.3 269 78.8
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 2.4e-94 349.4 268 77.2
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 5.4e-94 348.2 267 71.5
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 3.5e-93 345.5 265 76.6
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 9.6e-83 310.8 264 70.5
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 3.7e-74 282.3 264 64.4
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.2e-72 277.3 266 58.6
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 6.9e-65 251.5 198 65.7
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 2.6e-64 249.6 198 65.7
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 4.5e-64 248.8 183 66.1
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.4e-62 243.8 266 55.3
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 5.5e-62 241.9 195 61.5
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 9.3e-62 241.1 193 61.7
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 1.2e-61 240.7 194 63.9
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.6e-61 240.4 185 64.9
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.7e-61 239.6 190 64.2
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 2.7e-61 239.6 190 64.2
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 3.5e-61 239.2 269 52.0
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 4.6e-61 238.8 261 51.3
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.9e-60 235.7 190 63.2
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 3.9e-60 235.7 188 65.4
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 8.7e-60 234.6 236 60.2
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.9e-59 233.4 230 59.1
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 3.3e-59 232.6 184 63.6
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 7.4e-59 231.5 243 53.9
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 7.4e-59 231.5 197 61.9
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.3e-58 230.7 191 61.8
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 1.3e-58 230.7 266 51.5
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 1.3e-58 230.7 249 54.6
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.3e-58 230.7 239 55.2
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.6e-58 230.3 267 50.2
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 2.8e-58 229.6 266 52.3
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 2.8e-58 229.6 189 62.4
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 3.7e-58 229.2 207 58.5
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 3.7e-58 229.2 198 60.6
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 6.3e-58 228.4 193 61.1
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 6.3e-58 228.4 191 63.4
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 6.3e-58 228.4 191 63.4
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 8.2e-58 228.0 182 63.2
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 8.2e-58 228.0 158 71.5
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 8.2e-58 228.0 189 61.9
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 8.2e-58 228.0 261 51.3
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-57 227.6 182 63.2
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.4e-57 227.3 202 59.4
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 1.4e-57 227.3 252 53.2
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.4e-57 227.3 182 63.2
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.4e-57 227.3 198 60.6
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 2.4e-57 226.5 154 70.8
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.4e-57 226.5 153 71.2
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 2.4e-57 226.5 195 61.0
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.1e-57 226.1 182 63.2
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 5.3e-57 225.3 262 54.6
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 5.3e-57 225.3 267 50.6
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 5.3e-57 225.3 265 56.2
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 9.0e-57 224.6 197 58.9
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.2e-56 224.2 267 50.6
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.2e-56 224.2 237 53.2
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 1.5e-56 223.8 239 53.6
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 2.6e-56 223.0 195 56.9
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 2.6e-56 223.0 174 63.2
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 2.6e-56 223.0 180 61.1
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 2.6e-56 223.0 186 60.8
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 2.6e-56 223.0 190 59.5
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 3.4e-56 222.6 277 46.6
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 4.5e-56 222.2 195 57.4
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 7.7e-56 221.5 279 47.0
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 7.7e-56 221.5 184 61.4
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.0e-55 221.1 184 60.9
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.7e-55 220.3 194 59.3
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.7e-55 220.3 258 54.3
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 2.2e-55 219.9 203 56.2
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 3.8e-55 219.2 191 59.7
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 3.8e-55 219.2 195 59.0
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 3.8e-55 219.2 193 59.6
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 6.5e-55 218.4 195 59.5
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 6.5e-55 218.4 263 53.2
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 1.1e-54 217.6 152 68.4
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.4e-54 217.2 203 56.7
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 2.5e-54 216.5 194 57.7
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 3.2e-54 216.1 275 47.3
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 7.2e-54 214.9 264 48.1
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 7.2e-54 214.9 264 49.2
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 7.2e-54 214.9 191 57.6
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 9.4e-54 214.5 164 64.0
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 1.2e-53 214.2 196 56.6
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.1e-53 213.4 205 54.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.1e-53 213.4 238 52.5
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 1.4e-52 210.7 186 57.5
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 2.3e-52 209.9 186 58.6
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 9.1e-49 198.0 177 58.8
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.5e-48 197.2 167 59.3
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 2.2e-47 193.4 205 54.6
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.7e-45 186.4 201 51.2
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 2.3e-44 183.3 148 60.1
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 1.7e-39 167.2 141 56.0
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.5e-38 163.3 157 51.6
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 9.4e-38 161.4 174 47.7
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 2.7e-37 159.8 188 49.5
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 3.6e-37 159.5 240 44.6
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 3.0e-36 156.4 171 44.4
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 5.2e-36 155.6 183 45.4
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 1.1e-35 154.5 138 55.8
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 2.0e-35 153.7 160 46.9
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 4.4e-35 152.5 167 47.3
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 5.9e-32 142.1 153 45.1
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 8.0e-29 131.7 168 39.9
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 1.3e-23 114.4 112 54.5
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 4.4e-19 99.4 109 51.4


User provided reference genes

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