Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p24780 Brassica napus HOM05D000031 ORTHO05D021793 1.9e-40 168.7 82 100.0
BolC6t37630H Brassica oleracea HOM05D000031 ORTHO05D021793 9.2e-40 166.4 82 98.8
BcaB02g07575 Brassica carinata HOM05D000031 ORTHO05D001033 2.9e-25 118.2 97 66.0
BcaC07g40155 Brassica carinata HOM05D000031 ORTHO05D001033 8.7e-22 106.7 92 64.1
BcaC07g40151 Brassica carinata HOM05D000031 ORTHO05D001033 7.4e-21 103.6 92 57.6
BcaC07g40339 Brassica carinata HOM05D000031 ORTHO05D001033 7.4e-21 103.6 92 64.1
A09p50670 Brassica napus HOM05D000031 ORTHO05D001033 7.4e-21 103.6 92 64.1
BcaC08g44865 Brassica carinata HOM05D000031 ORTHO05D001033 4.8e-20 100.9 97 59.8
C06p24790 Brassica napus HOM05D000031 ORTHO05D001033 6.2e-20 100.5 97 59.8
BolC6t37631H Brassica oleracea HOM05D000031 ORTHO05D001033 6.2e-20 100.5 97 59.8
Aa31LG10G12460 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.4e-19 99.4 92 59.8
Aa31sc1360G30 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.4e-19 99.4 92 59.8
BcaB01g02436 Brassica carinata HOM05D000031 ORTHO05D001033 3.1e-19 98.2 91 59.3
BcaB02g08295 Brassica carinata HOM05D000031 ORTHO05D001033 9.0e-19 96.7 92 60.9
BcaB02g07574 Brassica carinata HOM05D000031 ORTHO05D001033 1.2e-18 96.3 82 70.7
A04p02960 Brassica napus HOM05D000031 ORTHO05D001033 2.6e-18 95.1 95 56.8
BraA04t16019Z Brassica rapa HOM05D000031 ORTHO05D001033 2.6e-18 95.1 95 56.8
A09p50600 Brassica napus HOM05D000031 ORTHO05D001033 4.5e-18 94.4 93 57.0
CARHR168010 Cardamine hirsuta HOM05D000031 ORTHO05D001033 4.5e-18 94.4 92 58.7
A04p02920 Brassica napus HOM05D000031 ORTHO05D001033 1.0e-17 93.2 92 59.8
BcaC07g40152 Brassica carinata HOM05D000031 ORTHO05D001033 1.3e-17 92.8 92 56.5
C04p34700 Brassica napus HOM05D000031 ORTHO05D041586 1.3e-17 92.8 92 58.7
BolC4t25023H Brassica oleracea HOM05D000031 ORTHO05D041586 1.3e-17 92.8 92 58.7
AL5G39380 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 2.9e-17 91.7 94 56.4
BolC8t50934H Brassica oleracea HOM05D000031 ORTHO05D001033 1.1e-16 89.7 89 57.3
Thhalv10006481m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.9e-16 89.0 94 56.4
BcaB02g07582 Brassica carinata HOM05D000031 ORTHO05D021793 2.5e-16 88.6 88 55.7
C04p34690 Brassica napus HOM05D000031 ORTHO05D001033 3.2e-16 88.2 97 56.7
BolC4t25022H Brassica oleracea HOM05D000031 ORTHO05D001033 3.2e-16 88.2 97 56.7
BraA09t40510Z Brassica rapa HOM05D000031 ORTHO05D001033 3.2e-16 88.2 92 53.3
Aa31LG10G12500 Aethionema arabicum HOM05D000031 ORTHO05D001033 9.3e-16 86.7 92 54.3
BcaC01g06306 Brassica carinata HOM05D000031 ORTHO05D001033 2.7e-15 85.1 91 53.8
A09p50560 Brassica napus HOM05D000031 ORTHO05D001033 2.7e-15 85.1 83 57.8
BolC3t14128H Brassica oleracea HOM05D000031 ORTHO05D001033 2.7e-15 85.1 91 53.8
A03p14650 Brassica napus HOM05D000031 ORTHO05D001033 3.5e-15 84.7 92 54.3
BraA03t10756Z Brassica rapa HOM05D000031 ORTHO05D001033 3.5e-15 84.7 92 54.3
Thhalv10006091m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 3.5e-15 84.7 92 53.3
A04p02930 Brassica napus HOM05D000031 ORTHO05D021793 1.8e-14 82.4 90 56.7
BcaB02g08296 Brassica carinata HOM05D000031 ORTHO05D021793 2.3e-14 82.0 85 54.1
BraA04t16016Z Brassica rapa HOM05D000031 ORTHO05D001033 2.3e-14 82.0 83 60.2
BolC4t25026H Brassica oleracea HOM05D000031 ORTHO05D042498 3.0e-14 81.6 92 52.2
BcaB03g14606 Brassica carinata HOM05D000031 ORTHO05D001033 1.1e-13 79.7 101 44.6
C03p17140 Brassica napus HOM05D000031 ORTHO05D001033 1.1e-13 79.7 92 52.2
Thhalv10006099m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.1e-13 79.7 93 52.7
C04p34650 Brassica napus HOM05D000031 ORTHO05D001033 1.9e-13 79.0 88 51.1
BcaC07g40154 Brassica carinata HOM05D000031 ORTHO05D001033 3.3e-13 78.2 94 51.1
A05p16590 Brassica napus HOM05D000031 ORTHO05D001033 1.3e-12 76.3 61 67.2
BolC4t21981H Brassica oleracea HOM05D001334 ORTHO05D001119 1.3e-12 76.3 90 54.4
A09p50620 Brassica napus HOM05D000031 ORTHO05D001033 2.1e-12 75.5 84 52.4
BolC4t25020H Brassica oleracea HOM05D000031 ORTHO05D001033 1.8e-11 72.4 86 48.8
CARHR167840 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.8e-11 72.4 100 45.0
Carub.0005s2455 Capsella rubella HOM05D000031 ORTHO05D001033 3.1e-11 71.6 100 44.0
A04p06020 Brassica napus HOM05D000031 ORTHO05D001033 4.0e-11 71.2 102 43.1
BraA04t16306Z Brassica rapa HOM05D000031 ORTHO05D001033 4.0e-11 71.2 102 43.1
BcaC02g09960 Brassica carinata HOM05D000031 ORTHO05D001033 6.9e-11 70.5 80 50.0
Carub.0005s2457 Capsella rubella HOM05D000031 ORTHO05D001033 1.5e-10 69.3 97 42.3
AL4G40690 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 2.6e-10 68.6 89 49.4
Thhalv10000211m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 2.6e-10 68.6 101 43.6
Thhalv10006071m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 4.5e-10 67.8 101 42.6
AT3G57730 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 7.6e-10 67.0 101 39.6
BcaB01g02797 Brassica carinata HOM05D000031 ORTHO05D001033 7.6e-10 67.0 97 45.4
C04p34720 Brassica napus HOM05D000031 ORTHO05D042498 1.3e-09 66.2 61 55.7
A03p28490 Brassica napus HOM05D000031 ORTHO05D001033 2.2e-09 65.5 97 44.3
C03p34430 Brassica napus HOM05D000031 ORTHO05D001033 2.2e-09 65.5 97 44.3
BcaC01g04726 Brassica carinata HOM05D000031 ORTHO05D001033 2.9e-09 65.1 97 44.3
BolC3t15752H Brassica oleracea HOM05D000031 ORTHO05D001033 2.9e-09 65.1 97 44.3
Aa31LG10G12480 Aethionema arabicum HOM05D000031 ORTHO05D001033 6.5e-09 63.9 98 41.8
C08p33360 Brassica napus HOM05D000031 ORTHO05D001033 2.5e-08 62.0 77 51.9
A09p50610 Brassica napus HOM05D000031 ORTHO05D001033 4.2e-08 61.2 95 42.1
Sp3g24520 Schrenkiella parvula HOM05D000031 ORTHO05D001033 4.2e-08 61.2 98 41.8
Aa31sc1360G10 Aethionema arabicum HOM05D000031 ORTHO05D001033 5.5e-08 60.8 99 40.4
Sp6g08210 Schrenkiella parvula HOM05D000031 ORTHO05D001033 5.5e-08 60.8 84 46.4
BcaB08g36026 Brassica carinata HOM05D000031 ORTHO05D001033 7.1e-08 60.5 98 38.8
THA.LOC104802335 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 7.1e-08 60.5 101 40.6
AT3G57710 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 9.3e-08 60.1 100 39.0
CARHR167980 Cardamine hirsuta HOM05D000031 ORTHO05D001033 9.3e-08 60.1 100 37.0
AL5G39350 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 1.2e-07 59.7 101 38.6
AT3G57720 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 1.2e-07 59.7 98 38.8
CARHR167860 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.6e-07 59.3 101 37.6
Sabra02G0002100 Salix brachista HOM05D000031 ORTHO05D001033 1.6e-07 59.3 92 42.4
AL5G39330 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 2.7e-07 58.5 100 40.0
BcaB02g07578 Brassica carinata HOM05D000031 ORTHO05D093958 2.7e-07 58.5 42 66.7
C09p48660 Brassica napus HOM05D000031 ORTHO05D001033 2.7e-07 58.5 98 37.8
AL5G39360 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 4.6e-07 57.8 95 40.0
CARHR167960 Cardamine hirsuta HOM05D000031 ORTHO05D001033 4.6e-07 57.8 95 41.1
CARHR167990 Cardamine hirsuta HOM05D000031 ORTHO05D001033 4.6e-07 57.8 95 40.0
CARHR168000 Cardamine hirsuta HOM05D000031 ORTHO05D001033 4.6e-07 57.8 101 41.6
BcaC07g39602 Brassica carinata HOM05D000031 ORTHO05D001033 6.1e-07 57.4 97 40.2
C08p27590 Brassica napus HOM05D000031 ORTHO05D001033 6.1e-07 57.4 97 40.2
BolC8t50378H Brassica oleracea HOM05D000031 ORTHO05D001033 6.1e-07 57.4 97 40.2
Carub.0005s2456 Capsella rubella HOM05D000031 ORTHO05D001033 6.1e-07 57.4 98 36.7
BolC4t25025H Brassica oleracea HOM05D000031 ORTHO05D001033 7.9e-07 57.0 93 46.2
AL4G17380 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 1.8e-06 55.8 101 40.6
C04p34710 Brassica napus HOM05D000031 ORTHO05D001033 1.8e-06 55.8 93 45.2
AL5G39340 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 2.3e-06 55.5 97 37.1
BcaB01g00378 Brassica carinata HOM05D000031 ORTHO05D001033 2.3e-06 55.5 97 41.2
BcaC02g09287 Brassica carinata HOM05D000031 ORTHO05D001033 3.0e-06 55.1 99 41.4
C04p40940 Brassica napus HOM05D000031 ORTHO05D001033 3.0e-06 55.1 99 41.4
BolC4t25677H Brassica oleracea HOM05D000031 ORTHO05D001033 3.0e-06 55.1 99 41.4
A04p07330 Brassica napus HOM05D000031 ORTHO05D001033 3.9e-06 54.7 96 40.6
BcaC04g20026 Brassica carinata HOM05D000031 ORTHO05D001033 5.1e-06 54.3 108 35.2
THA.LOC104799098 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 5.1e-06 54.3 101 34.7
AL5G39370 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 6.7e-06 53.9 97 39.2
Potri.002G003300 Populus trichocarpa HOM05D000031 ORTHO05D001033 6.7e-06 53.9 101 40.6


User provided reference genes

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