Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p24350 Brassica napus HOM05D001672 ORTHO05D101485 1.3e-67 259.6 132 100.0
Thhalv10006006m.g Eutrema salsugineum HOM05D001672 ORTHO05D008153 6.7e-24 114.4 124 57.3
A09p50130 Brassica napus HOM05D001672 ORTHO05D008153 1.1e-23 113.6 116 61.2
C08p32500 Brassica napus HOM05D001672 ORTHO05D008153 1.1e-23 113.6 122 58.2
BraA09t40464Z Brassica rapa HOM05D001672 ORTHO05D008153 1.1e-23 113.6 116 61.2
BcaC07g40066 Brassica carinata HOM05D001672 ORTHO05D008153 4.4e-23 111.7 124 56.5
BcaNung06571 Brassica carinata HOM05D001672 ORTHO05D008153 4.4e-23 111.7 124 56.5
Sp5g05380 Schrenkiella parvula HOM05D001672 ORTHO05D008153 2.8e-22 109.0 126 55.6
AL5G38680 Arabidopsis lyrata HOM05D001672 ORTHO05D008153 8.2e-22 107.5 121 55.4
Carub.0005s2401 Capsella rubella HOM05D001672 ORTHO05D008153 8.2e-22 107.5 118 55.1
AT3G57190 Arabidopsis thaliana HOM05D001672 ORTHO05D008153 2.5e-18 95.9 121 49.6
Aa31LG10G12100 Aethionema arabicum HOM05D001672 ORTHO05D008153 1.8e-16 89.7 128 46.1
THA.LOC104824425 Tarenaya hassleriana HOM05D001672 ORTHO05D008153 1.0e-11 73.9 105 48.6
Aa31LG3G8060 Aethionema arabicum HOM05D001672 ORTHO05D008153 1.1e-10 70.5 71 57.7
Cpa.g.sc120.14 Carica papaya HOM05D001672 ORTHO05D008153 3.2e-10 68.9 132 40.2
Migut.J01698 Erythranthe guttata HOM05D001672 ORTHO05D008153 1.0e-08 63.9 98 37.8
Thecc.05G144700 Theobroma cacao HOM05D001672 ORTHO05D008153 1.8e-08 63.2 87 43.7
COL.COLO4_21292 Corchorus olitorius HOM05D001672 ORTHO05D008153 6.7e-08 61.2 91 42.9
Ciclev10005039m.g Citrus clementina HOM05D001672 ORTHO05D008153 1.2e-07 60.5 117 37.6
Lsat_1_v5_gn_5_6501 Lactuca sativa HOM05D001672 ORTHO05D008153 1.2e-07 60.5 142 36.6
Lsat_1_v5_gn_8_83140 Lactuca sativa HOM05D001672 ORTHO05D008153 1.2e-07 60.5 142 36.6
TPR.G19649 Trifolium pratense HOM05D001672 ORTHO05D008153 1.2e-07 60.5 92 42.4
Glyma.03G008400 Glycine max HOM05D001672 ORTHO05D008153 3.3e-07 58.9 127 33.1
Glyma.10G105300 Glycine max HOM05D001672 ORTHO05D008153 3.3e-07 58.9 127 33.1
TWI74G0460 Tripterygium wilfordii HOM05D001672 ORTHO05D008153 3.3e-07 58.9 131 36.6
Cfa016750 Carpinus fangiana HOM05D001672 ORTHO05D008153 5.7e-07 58.2 130 37.7
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 1.3e-06 57.0 92 41.3
Aqoxy2G00268 Aquilegia oxysepala HOM05D001672 ORTHO05D008153 1.3e-06 57.0 92 41.3
Cc06_g18400 Coffea canephora HOM05D001672 ORTHO05D008153 1.3e-06 57.0 96 36.5
vmacro09041 Vaccinium macrocarpon HOM05D001672 ORTHO05D008153 1.7e-06 56.6 89 39.3
CAN.G1656.9 Capsicum annuum HOM05D001672 ORTHO05D008153 2.2e-06 56.2 81 38.3
Hma1.2p1_0222F.1_g093440 Hydrangea macrophylla HOM05D001672 ORTHO05D008153 2.2e-06 56.2 132 35.6
Atru.chr1.1244 Acer truncatum HOM05D001672 ORTHO05D008153 4.8e-06 55.1 78 44.9
Actinidia38144 Actinidia chinensis HOM05D001260 ORTHO05D002424 6.3e-06 54.7 91 40.7
MSTRG.6399 Avicennia marina HOM05D001672 ORTHO05D008153 6.3e-06 54.7 76 39.5
Glyma.02G191600 Glycine max HOM05D001672 ORTHO05D008153 6.3e-06 54.7 108 35.2
CSS0031282 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D008153 8.2e-06 54.3 94 38.3
VMungo0720G0829 Vigna mungo HOM05D001672 ORTHO05D008153 8.2e-06 54.3 82 40.2


User provided reference genes

Program Settings