Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 7.1e-164 580.5 284 100.0
BolC1t00999H Brassica oleracea HOM05D018430 ORTHO05D020143 4.1e-79 298.9 165 91.5
A10p03550 Brassica napus HOM05D018430 ORTHO05D020143 3.5e-78 295.8 165 91.5
BraA10t42632Z Brassica rapa HOM05D018430 ORTHO05D020143 3.5e-78 295.8 165 91.5
A05p11680 Brassica napus HOM05D018430 ORTHO05D020143 8.6e-77 291.2 165 90.3
BraA06t26448Z Brassica rapa HOM05D018430 ORTHO05D020143 8.6e-77 291.2 165 90.3
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-56 224.2 120 88.3
BcaC09g51700 Brassica carinata HOM05D018430 ORTHO05D020143 5.6e-44 182.2 96 97.9
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-36 157.5 119 58.0
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 4.3e-36 156.0 119 56.3
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-35 153.7 119 55.5
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-35 152.9 119 54.6
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 6.3e-35 152.1 119 54.6
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-34 151.0 119 54.6
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-33 147.1 117 56.4
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 7.2e-31 138.7 118 51.7
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 7.9e-30 135.2 114 54.4
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-29 133.7 118 49.2
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-29 133.7 113 52.2
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 6.7e-29 132.1 114 53.5
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 7.4e-28 128.6 119 51.3
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.8e-24 116.3 78 64.1
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.5e-24 115.5 91 56.0
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 8.5e-24 115.2 94 54.3
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-23 113.2 119 42.9
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 2.1e-22 110.5 118 47.5
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-22 109.8 119 42.0
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 7.9e-22 108.6 119 43.7
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 1.8e-21 107.5 118 44.9
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.8e-21 107.5 74 64.9
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 3.0e-21 106.7 118 45.8
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-21 106.3 50 98.0
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 5.1e-21 105.9 118 44.1
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 5.1e-21 105.9 118 44.9
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 8.8e-21 105.1 119 39.5
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.1e-20 104.8 119 42.0
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 1.5e-20 104.4 129 43.4
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 4.3e-20 102.8 50 96.0
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 5.7e-20 102.4 100 48.0
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-19 101.3 119 37.8
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-19 100.1 117 39.3
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-18 98.2 115 37.4
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-18 98.2 115 37.4
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-18 97.8 119 39.5
C08p23400 Brassica napus HOM05D003839 ORTHO05D003352 5.3e-18 95.9 120 41.7
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 9.1e-18 95.1 119 37.0
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-17 93.2 117 35.9
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-17 93.2 117 35.9
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-17 92.4 113 38.1
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-17 92.4 113 38.1
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-16 91.3 118 39.0
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-16 90.1 71 54.9
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-16 90.1 71 54.9
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-16 90.1 71 54.9
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-15 88.2 100 40.0
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-15 87.0 115 35.7
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 2.5e-15 87.0 77 53.2
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-15 86.3 111 36.0
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 5.5e-15 85.9 119 34.5
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-15 85.5 77 48.1
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-15 85.5 115 36.5
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-15 85.5 115 36.5
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 7.2e-15 85.5 119 33.6
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 7.2e-15 85.5 117 34.2
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 7.2e-15 85.5 119 34.5
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 7.2e-15 85.5 119 33.6
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-15 85.1 114 34.2
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 9.4e-15 85.1 119 35.3
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 9.4e-15 85.1 115 36.5
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 1.2e-14 84.7 114 35.1
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-14 84.7 115 35.7
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-14 84.7 115 35.7
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 1.2e-14 84.7 119 33.6
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 1.2e-14 84.7 119 32.8
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 1.2e-14 84.7 119 32.8
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-14 84.3 114 34.2
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-14 84.3 77 51.9
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-14 84.0 115 36.5
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-14 84.0 76 51.3
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-14 83.6 114 34.2
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 2.7e-14 83.6 115 36.5
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-14 83.2 115 35.7
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-14 83.2 115 35.7
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-14 83.2 115 35.7
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 3.6e-14 83.2 115 35.7
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-14 83.2 115 35.7
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 4.7e-14 82.8 119 33.6
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-14 82.8 115 36.5
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-14 82.4 87 41.4
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-14 82.4 116 37.1
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 6.1e-14 82.4 114 36.0
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-13 81.6 65 56.9
A06p31430 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-13 81.6 68 51.5
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-13 80.9 110 34.5
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 2.3e-13 80.5 113 33.6
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-13 80.5 99 39.4
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-13 80.1 116 37.1
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-13 79.7 66 50.0
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 6.7e-13 79.0 88 39.8
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 8.8e-13 78.6 117 32.5
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 8.8e-13 78.6 115 33.9
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 1.1e-12 78.2 119 37.8
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-12 77.8 83 41.0
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-12 77.8 117 33.3
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 1.5e-12 77.8 102 37.3
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 2.0e-12 77.4 112 32.1
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 2.0e-12 77.4 112 32.1
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 2.0e-12 77.4 111 35.1
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 3.3e-12 76.6 102 37.3
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 3.3e-12 76.6 102 37.3
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 4.4e-12 76.3 102 37.3
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 4.4e-12 76.3 102 37.3
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 4.4e-12 76.3 86 41.9
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 7.4e-12 75.5 120 34.2
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 9.7e-12 75.1 120 34.2
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 9.7e-12 75.1 111 32.4
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 9.7e-12 75.1 66 50.0
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 9.7e-12 75.1 116 35.3
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-11 74.7 82 41.5
A06p08980 Brassica napus HOM05D010997 ORTHO05D014498 1.3e-11 74.7 119 37.8
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-11 74.7 82 41.5
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 1.7e-11 74.3 71 50.7
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 1.7e-11 74.3 89 39.3
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-11 73.9 79 40.5
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 3.7e-11 73.2 97 37.1
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-11 72.8 115 31.3
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 4.8e-11 72.8 115 31.3
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-10 71.6 97 36.1
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.4e-10 70.5 74 45.9
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 3.1e-10 70.1 73 41.1
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-10 69.7 86 40.7
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 9.1e-10 68.6 94 35.1
BcaC03g14877 Brassica carinata HOM05D010997 ORTHO05D014498 1.6e-09 67.8 88 38.6
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-09 67.4 104 32.7
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-09 67.0 115 32.2
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-09 66.2 78 38.5
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 4.5e-09 66.2 74 37.8
BcaB08g35019 Brassica carinata HOM05D008883 ORTHO05D011075 5.9e-09 65.9 68 41.2
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 5.9e-09 65.9 61 44.3
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 5.9e-09 65.9 68 41.2
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 7.7e-09 65.5 118 30.5
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 7.7e-09 65.5 119 31.1
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-08 65.1 112 32.1
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-08 65.1 75 41.3
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 1.0e-08 65.1 71 45.1
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-08 64.3 118 30.5
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-08 64.3 75 41.3
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-08 64.3 89 36.0
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-08 63.9 112 31.2
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-08 63.9 112 31.2
BcaC07g37552 Brassica carinata HOM05D010997 ORTHO05D014498 2.2e-08 63.9 75 42.7
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-08 63.9 63 44.4
C06p24900 Brassica napus HOM05D010997 ORTHO05D003352 2.9e-08 63.5 66 43.9
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-08 63.5 63 44.4
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 3.8e-08 63.2 53 49.1
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-08 63.2 112 32.1
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 3.8e-08 63.2 69 36.2
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 3.8e-08 63.2 69 36.2
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 3.8e-08 63.2 69 36.2
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-08 62.0 71 42.3
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 8.5e-08 62.0 63 42.9
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 8.5e-08 62.0 113 29.2
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 8.5e-08 62.0 113 29.2
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 1.1e-07 61.6 117 27.4
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-07 61.2 110 31.8
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-07 60.8 112 30.4
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 1.9e-07 60.8 114 29.8
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 3.2e-07 60.1 69 34.8
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-07 59.7 65 41.5
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 4.2e-07 59.7 50 50.0
BcaB06g27532 Brassica carinata HOM05D008883 ORTHO05D011075 5.5e-07 59.3 65 40.0
A09p13700 Brassica napus HOM05D009411 ORTHO05D014997 7.2e-07 58.9 81 35.8
BraA09t40167Z Brassica rapa HOM05D009411 ORTHO05D014997 7.2e-07 58.9 81 35.8
BcaB06g28304 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-07 58.5 58 43.1
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-07 58.5 115 27.8
BraA06t25217Z Brassica rapa HOM05D003839 ORTHO05D003352 9.4e-07 58.5 66 40.9
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 1.2e-06 58.2 69 34.8
BcaC05g29665 Brassica carinata HOM05D008883 ORTHO05D011075 1.2e-06 58.2 106 28.3
C08p54100 Brassica napus HOM05D008883 ORTHO05D011075 1.2e-06 58.2 106 28.3
BolC8t52918H Brassica oleracea HOM05D008883 ORTHO05D011075 1.2e-06 58.2 106 28.3
BcaC02g08358 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-06 57.8 62 37.1
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 1.6e-06 57.8 62 37.1
BolC8t47715H Brassica oleracea HOM05D008292 ORTHO05D003352 1.6e-06 57.8 68 33.8
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 2.1e-06 57.4 69 33.3
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 2.1e-06 57.4 69 34.8
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 2.1e-06 57.4 69 34.8
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 2.1e-06 57.4 69 34.8
BolC8t47717H Brassica oleracea HOM05D003839 ORTHO05D003352 2.7e-06 57.0 50 46.0
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-06 56.6 66 40.9
C08p36920 Brassica napus HOM05D008292 ORTHO05D003352 3.6e-06 56.6 69 33.3
SpUn0486_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 4.7e-06 56.2 119 27.7
A09p47020 Brassica napus HOM05D009411 ORTHO05D014997 6.1e-06 55.8 72 37.5
SpUn1299_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 6.1e-06 55.8 119 26.9


User provided reference genes

Program Settings