Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23830 Brassica napus HOM05D005060 ORTHO05D005975 8.9e-54 213.8 144 100.0
BolC6t37551H Brassica oleracea HOM05D005060 ORTHO05D005975 3.7e-52 208.4 144 97.9
BcaC07g40108 Brassica carinata HOM05D005060 ORTHO05D005975 4.4e-45 184.9 144 86.8
BcaC07g40003 Brassica carinata HOM05D005060 ORTHO05D005975 2.2e-44 182.6 144 78.5
A04p03610 Brassica napus HOM05D005060 ORTHO05D005975 2.2e-44 182.6 144 81.2
C08p32160 Brassica napus HOM05D005060 ORTHO05D005975 2.2e-44 182.6 144 78.5
BolC8t50834H Brassica oleracea HOM05D005060 ORTHO05D005975 2.2e-44 182.6 144 78.5
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 9.2e-43 177.2 144 76.4
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 9.2e-43 177.2 144 76.4
BcaC02g09878 Brassica carinata HOM05D005060 ORTHO05D005975 1.6e-42 176.4 147 77.6
C04p35630 Brassica napus HOM05D005060 ORTHO05D005975 1.6e-42 176.4 147 77.6
BolC4t25241H Brassica oleracea HOM05D005060 ORTHO05D005975 1.6e-42 176.4 147 77.6
Thhalv10006294m.g Eutrema salsugineum HOM05D005060 ORTHO05D005975 4.6e-42 174.9 151 84.8
Sp5g05680 Schrenkiella parvula HOM05D005060 ORTHO05D005975 4.6e-42 174.9 152 77.0
BraA07t29972Z Brassica rapa HOM05D000531 ORTHO05D001630 5.0e-41 171.4 148 75.0
BcaB02g08343 Brassica carinata HOM05D005060 ORTHO05D005975 1.9e-40 169.5 144 73.6
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 8.1e-39 164.1 134 70.9
A07p23120 Brassica napus HOM05D005060 ORTHO05D005975 1.2e-37 160.2 145 72.4
Carub.0005s2365 Capsella rubella HOM05D005060 ORTHO05D005975 1.7e-36 156.4 153 75.2
CARHR167060 Cardamine hirsuta HOM05D005060 ORTHO05D005975 3.7e-36 155.2 152 70.4
AL5G38310 Arabidopsis lyrata HOM05D005060 ORTHO05D005975 1.4e-35 153.3 154 74.0
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 2.7e-34 149.1 151 66.9
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 8.4e-20 100.9 76 76.3
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 8.4e-20 100.9 76 76.3
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 8.4e-20 100.9 76 76.3
BcaB03g14272 Brassica carinata HOM05D005060 ORTHO05D005975 2.7e-18 95.9 105 61.9
Aa31LG10G11770 Aethionema arabicum HOM05D005060 ORTHO05D005975 6.6e-17 91.3 156 66.0
THA.LOC104803240 Tarenaya hassleriana HOM05D005060 ORTHO05D005975 1.2e-10 70.5 152 58.6
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 6.2e-07 58.2 149 46.3
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 6.2e-07 58.2 155 41.9
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 8.1e-07 57.8 140 52.9
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 1.8e-06 56.6 154 39.0
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.8e-06 56.6 147 38.1
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 6.9e-06 54.7 151 38.4


User provided reference genes

Program Settings