Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 2.3e-121 439.9 429 100.0
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 1.5e-77 294.3 426 73.7
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 8.8e-49 198.7 352 58.8
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 5.3e-46 189.5 170 92.4
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.2e-42 178.3 324 75.3
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 1.6e-42 177.9 341 69.8
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 5.7e-40 169.5 166 81.3
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 9.1e-38 162.2 170 82.9
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 1.6e-37 161.4 314 74.5
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 9.4e-35 152.1 324 67.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.0e-33 147.1 618 45.8
C09p19220 Brassica napus HOM05D004128 ORTHO05D102580 4.0e-33 146.7 204 74.5
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-32 144.1 324 52.5
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 2.8e-31 140.6 163 69.3
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 5.4e-30 136.3 372 58.1
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 7.0e-30 136.0 364 58.8
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 9.1e-30 135.6 81 87.7
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.2e-29 135.2 534 44.9
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.9e-27 127.9 199 49.2
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.9e-27 127.9 199 49.2
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 2.8e-26 124.0 66 97.0
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 2.8e-26 124.0 395 56.7
C03p85510 Brassica napus HOM05D004128 ORTHO05D013239 5.7e-24 116.3 160 55.6
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 9.8e-24 115.5 71 85.9
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 4.9e-23 113.2 347 65.7
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 8.3e-23 112.5 169 74.6
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 2.7e-21 107.5 170 58.2
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-20 104.4 61 88.5
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 2.3e-20 104.4 349 64.5
BcaC04g22448 Brassica carinata HOM05D004128 ORTHO05D096019 3.9e-20 103.6 293 62.5
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 6.6e-20 102.8 176 53.4
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 3.1e-17 94.0 71 78.9
BolC8t52229H Brassica oleracea HOM05D004128 ORTHO05D013239 3.1e-17 94.0 71 78.9
C01p37540 Brassica napus HOM05D004128 ORTHO05D013239 8.9e-17 92.4 84 78.6
C09p52710 Brassica napus HOM05D004128 ORTHO05D013239 8.9e-17 92.4 81 72.8
C08p27820 Brassica napus HOM05D004128 ORTHO05D013239 1.2e-16 92.0 81 74.1
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 1.5e-16 91.7 67 73.1
C03p49790 Brassica napus HOM05D004128 ORTHO05D013239 4.9e-15 86.7 79 78.5
C08p39070 Brassica napus HOM05D004128 ORTHO05D013239 4.9e-15 86.7 79 78.5
BcaC08g42938 Brassica carinata HOM05D004128 ORTHO05D091119 2.4e-14 84.3 217 71.0
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-13 81.6 177 37.3
BcaC01g00878 Brassica carinata HOM05D004128 ORTHO05D096075 2.0e-13 81.3 79 64.6
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 2.0e-13 81.3 242 47.1
C04p23880 Brassica napus HOM05D004128 ORTHO05D013239 4.6e-13 80.1 73 71.2
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 1.7e-12 78.2 79 62.0
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-11 75.5 284 31.7
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-11 75.1 49 77.6
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 2.5e-11 74.3 267 41.9
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 4.3e-11 73.6 270 36.3
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-11 73.6 106 49.1
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 9.5e-11 72.4 348 36.5
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-10 71.2 114 47.4
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 3.6e-10 70.5 267 41.6
BraA01t02269Z Brassica rapa HOM05D004128 ORTHO05D013239 3.6e-10 70.5 77 63.6
A09p66380 Brassica napus HOM05D004128 ORTHO05D013239 4.7e-10 70.1 70 74.3
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 8.1e-10 69.3 269 40.9
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 8.1e-10 69.3 81 54.3
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-09 68.6 165 32.7
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 1.8e-09 68.2 49 73.5
C06p17700 Brassica napus HOM05D004128 ORTHO05D013239 2.3e-09 67.8 65 70.8
BolC8t51479H Brassica oleracea HOM05D004128 ORTHO05D041843 3.1e-09 67.4 35 91.4
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 5.2e-09 66.6 81 54.3
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 5.2e-09 66.6 81 54.3
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-09 66.6 87 55.2
BolC3t16798H Brassica oleracea HOM05D004128 ORTHO05D013239 1.5e-08 65.1 36 94.4
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-08 64.7 83 51.8
BolC8t50773H Brassica oleracea HOM05D004128 ORTHO05D013239 3.4e-08 63.9 36 91.7
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-08 63.5 77 53.2
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 4.4e-08 63.5 88 46.6
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 4.4e-08 63.5 83 49.4
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 5.8e-08 63.2 77 54.5
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 5.8e-08 63.2 76 55.3
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 5.8e-08 63.2 60 58.3
A05p08790 Brassica napus HOM05D004128 ORTHO05D103552 7.5e-08 62.8 69 60.9
BcaC02g10903 Brassica carinata HOM05D004128 ORTHO05D013239 9.8e-08 62.4 49 75.5
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 1.3e-07 62.0 83 47.0
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-07 62.0 72 51.4
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-07 62.0 83 48.2
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.3e-07 62.0 72 51.4
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 2.2e-07 61.2 78 51.3
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 4.9e-07 60.1 115 42.6
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 4.9e-07 60.1 86 51.2
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 6.4e-07 59.7 81 50.6
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 6.4e-07 59.7 48 68.8
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 8.3e-07 59.3 82 48.8
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 1.1e-06 58.9 55 61.8
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-06 58.9 94 48.9
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-06 58.9 113 49.6
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-06 58.9 113 49.6
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-06 58.5 117 46.2
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.9e-06 58.2 92 44.6
A09p21940 Brassica napus HOM05D004128 ORTHO05D013239 1.9e-06 58.2 38 81.6
C01p27650 Brassica napus HOM05D004128 ORTHO05D041843 1.9e-06 58.2 34 82.4
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.9e-06 58.2 92 44.6
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-06 58.2 85 52.9
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.4e-06 57.8 82 47.6
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 4.1e-06 57.0 78 56.4
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 4.1e-06 57.0 212 42.5
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 4.1e-06 57.0 113 48.7
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 5.4e-06 56.6 75 54.7
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 5.4e-06 56.6 87 44.8
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 7.1e-06 56.2 67 55.2
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 7.1e-06 56.2 68 55.9
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 9.2e-06 55.8 86 48.8


User provided reference genes

Program Settings