Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 5.0e-182 641.0 322 100.0
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 4.9e-177 624.4 323 97.8
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 1.0e-174 616.7 332 95.2
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 3.6e-164 581.6 336 90.2
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 3.6e-164 581.6 336 90.2
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 3.9e-150 535.0 322 85.4
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 1.3e-134 483.4 335 78.2
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 3.0e-126 455.7 334 73.7
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 3.0e-126 455.7 334 73.7
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 2.5e-125 452.6 334 73.7
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 2.5e-125 452.6 334 73.7
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 4.3e-125 451.8 334 73.7
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 6.3e-124 448.0 333 73.9
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 6.9e-123 444.5 333 73.3
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 5.0e-121 438.3 342 71.1
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 1.9e-117 426.4 337 70.3
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 1.1e-115 420.6 339 69.3
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.9e-112 409.8 337 68.8
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 2.3e-110 402.9 333 69.7
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 4.3e-109 398.7 339 69.0
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 1.8e-99 366.7 348 65.2
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.2e-98 364.0 340 63.5
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 4.4e-85 318.9 259 69.1
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 8.6e-57 224.9 200 66.0
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.2e-50 204.5 148 76.4
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.6e-50 204.1 317 47.6
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 7.3e-40 168.7 144 66.0
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 4.8e-15 86.3 336 28.9
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 2.4e-14 84.0 379 27.4
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 6.9e-14 82.4 274 28.1
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.0e-12 78.6 237 30.4
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.7e-12 77.8 369 26.3
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-12 77.4 360 26.7
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-12 77.4 360 26.9
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 2.9e-12 77.0 225 29.8
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.9e-12 77.0 191 30.4
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 2.9e-12 77.0 189 32.3
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 3.8e-12 76.6 234 31.2
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.9e-11 74.3 377 28.1
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 3.2e-11 73.6 369 27.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 4.2e-11 73.2 93 41.9
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.6e-10 71.2 380 25.8
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.1e-10 70.9 250 27.2
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 2.7e-10 70.5 190 28.9
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 2.7e-10 70.5 237 27.0
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 2.7e-10 70.5 358 26.0
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 3.5e-10 70.1 366 25.7
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 3.5e-10 70.1 385 25.5
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 3.5e-10 70.1 262 29.0
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 3.5e-10 70.1 234 25.2
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.5e-10 70.1 246 28.0
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.3e-09 68.2 427 23.4
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.3e-09 68.2 192 28.6
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 1.8e-09 67.8 310 26.1
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 3.0e-09 67.0 245 28.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 3.0e-09 67.0 379 26.1
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 5.1e-09 66.2 326 26.7
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 8.7e-09 65.5 385 25.2
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.5e-08 64.7 97 36.1
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 3.3e-08 63.5 267 24.0
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 1.6e-07 61.2 232 27.2
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.6e-07 61.2 147 30.6
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.1e-07 60.8 268 25.4
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.1e-07 60.8 216 26.9
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 2.1e-07 60.8 46 56.5
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 2.8e-07 60.5 242 28.1
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 2.8e-07 60.5 232 25.4
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 3.7e-07 60.1 106 34.9
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 1.8e-06 57.8 383 25.6
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 3.1e-06 57.0 276 23.9
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 6.9e-06 55.8 247 25.5
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 9.0e-06 55.5 380 25.0
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 9.0e-06 55.5 262 26.3


User provided reference genes

Program Settings