Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23710 Brassica napus HOM05D023425 ORTHO05D021699 5.4e-30 133.7 67 100.0
C04p28960 Brassica napus HOM05D023425 ORTHO05D021699 8.7e-28 126.3 67 95.5
C09p30660 Brassica napus HOM05D023425 ORTHO05D021699 4.0e-17 90.9 56 80.4
BolC9t55929H Brassica oleracea HOM05D023425 ORTHO05D021699 4.0e-17 90.9 56 80.4
BcaC05g29656 Brassica carinata HOM05D023425 ORTHO05D021699 1.3e-12 75.9 49 81.6
A03p38340 Brassica napus HOM05D000750 ORTHO05D000714 2.6e-08 61.6 34 88.2
BraA03t12986Z Brassica rapa HOM05D000750 ORTHO05D000714 2.6e-08 61.6 34 88.2
BcaC01g03981 Brassica carinata HOM05D000750 ORTHO05D000714 3.4e-08 61.2 34 88.2
C03p46540 Brassica napus HOM05D000750 ORTHO05D000714 3.4e-08 61.2 34 88.2
BolC3t16918H Brassica oleracea HOM05D000750 ORTHO05D000714 3.4e-08 61.2 34 88.2
BcaB04g20999 Brassica carinata HOM05D000750 ORTHO05D000714 7.6e-08 60.1 34 85.3
Carub.0003s1316 Capsella rubella HOM05D000750 ORTHO05D000714 7.6e-08 60.1 34 85.3
Sp3g11870 Schrenkiella parvula HOM05D000750 ORTHO05D000714 7.6e-08 60.1 34 85.3
BcaB04g18792 Brassica carinata HOM05D000750 ORTHO05D000714 1.0e-07 59.7 34 82.4
AL3G25630 Arabidopsis lyrata HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
AT3G13670 Arabidopsis thaliana HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
BcaC05g29160 Brassica carinata HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
A01p39910 Brassica napus HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
A05p35730 Brassica napus HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
C01p50930 Brassica napus HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
BolC1t05042H Brassica oleracea HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
BolC5t34083H Brassica oleracea HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
BraA01t04032Z Brassica rapa HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
BraA05t22380Z Brassica rapa HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
CARHR088370 Cardamine hirsuta HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
THA.LOC104822628 Tarenaya hassleriana HOM05D000750 ORTHO05D000714 1.7e-07 58.9 34 82.4
Aa31LG8G830 Aethionema arabicum HOM05D000750 ORTHO05D000714 3.8e-07 57.8 34 82.4
Aa31sc2107G10 Aethionema arabicum HOM05D000750 ORTHO05D012134 3.8e-07 57.8 34 82.4
Thhalv10020172m.g Eutrema salsugineum HOM05D000750 ORTHO05D000714 3.8e-07 57.8 34 82.4
BcaB06g25447 Brassica carinata HOM05D000750 ORTHO05D000714 4.9e-07 57.4 34 79.4
THA.LOC104815654 Tarenaya hassleriana HOM05D000750 ORTHO05D000714 4.9e-07 57.4 34 79.4
THA.LOC104810349 Tarenaya hassleriana HOM05D000750 ORTHO05D000714 6.5e-07 57.0 34 76.5
ATR0598G161 Amborella trichopoda HOM05D000750 ORTHO05D000714 1.9e-06 55.5 34 76.5
Thecc.09G215100 Theobroma cacao HOM05D000750 ORTHO05D000714 4.2e-06 54.3 34 70.6
Ah.06g193100 Amaranthus hybridus HOM05D000750 ORTHO05D000714 7.1e-06 53.5 34 73.5
Duzib168G0967 Durio zibethinus HOM05D000750 ORTHO05D000714 7.1e-06 53.5 34 67.6
PGR102G1866 Punica granatum HOM05D000750 ORTHO05D000714 7.1e-06 53.5 34 73.5


User provided reference genes

Program Settings