Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 4.2e-245 850.9 424 100.0
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 3.8e-169 598.6 300 97.7
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 1.1e-165 587.0 300 96.7
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 1.3e-164 583.6 300 96.3
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 3.7e-164 582.0 300 96.0
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 8.1e-164 580.9 300 95.7
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 3.6e-143 512.3 289 89.3
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 1.2e-69 268.1 224 65.2
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 1.2e-69 268.1 224 65.2
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 1.2e-69 268.1 224 65.2
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 7.1e-67 258.8 237 61.6
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 1.2e-66 258.1 237 61.2
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 1.2e-66 258.1 237 61.2
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 7.8e-66 255.4 239 60.7
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 6.0e-58 229.2 166 73.5
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 4.8e-55 219.5 234 57.3
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 4.8e-55 219.5 234 57.3
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 2.6e-53 213.8 233 56.2
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 1.1e-51 208.4 202 59.9
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 1.1e-51 208.4 156 69.9
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 1.0e-49 201.8 149 74.5
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 2.8e-47 193.7 167 62.9
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 7.6e-45 185.7 154 64.3
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 2.1e-42 177.6 154 61.7
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 1.8e-41 174.5 204 50.5
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 6.2e-39 166.0 148 66.2
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 6.3e-31 139.4 159 56.6
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 1.4e-30 138.3 151 58.3
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 1.7e-28 131.3 167 52.7
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 3.8e-28 130.2 150 58.0
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 8.5e-28 129.0 151 54.3
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 4.2e-27 126.7 151 54.3
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 1.4e-25 121.7 151 54.3
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 6.7e-25 119.4 151 53.6
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 6.7e-25 119.4 108 67.6
BraA07t31746Z Brassica rapa HOM05D008960 ORTHO05D108237 2.3e-17 94.4 50 88.0
BcaC01g00787 Brassica carinata HOM05D008960 ORTHO05D094263 6.7e-17 92.8 89 57.3
BcaC01g05426 Brassica carinata HOM05D008960 ORTHO05D021862 6.7e-17 92.8 93 59.1
BcaC01g06122 Brassica carinata HOM05D008960 ORTHO05D021862 8.8e-17 92.4 92 58.7
C07p18550 Brassica napus HOM05D008960 ORTHO05D103607 1.1e-16 92.0 54 81.5
C07p48840 Brassica napus HOM05D011932 ORTHO05D024153 9.7e-16 89.0 88 63.6
BolC7t45392H Brassica oleracea HOM05D011932 ORTHO05D024153 9.7e-16 89.0 88 63.6
A06p27480 Brassica napus HOM05D011932 ORTHO05D096777 7.7e-13 79.3 73 64.4
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 1.1e-08 65.5 129 41.1
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 1.1e-08 65.5 129 41.1
C08p15900 Brassica napus HOM05D021780 ORTHO05D021716 9.7e-08 62.4 106 44.3
BolC8t49214H Brassica oleracea HOM05D021780 ORTHO05D021716 9.7e-08 62.4 106 44.3
BcaC03g16984 Brassica carinata HOM05D010911 ORTHO05D024084 1.3e-07 62.0 58 56.9
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 1.3e-07 62.0 125 39.2
C06p07090 Brassica napus HOM05D009661 ORTHO05D020160 2.2e-07 61.2 121 39.7
BcaNung02568 Brassica carinata HOM05D021780 ORTHO05D021716 4.1e-06 57.0 47 66.0
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 5.3e-06 56.6 125 36.8


User provided reference genes

Program Settings