Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23620 Brassica napus HOM05D008477 ORTHO05D021917 2.3e-196 688.7 340 100.0
BolC6t37534H Brassica oleracea HOM05D008477 ORTHO05D021917 1.8e-172 609.4 349 88.8
A07p22990 Brassica napus HOM05D008477 ORTHO05D021917 6.8e-156 554.3 349 81.1
BcaC08g44792 Brassica carinata HOM05D008477 ORTHO05D021917 2.1e-152 542.7 353 81.0
BraA07t29962Z Brassica rapa HOM05D008477 ORTHO05D021917 1.7e-151 539.7 349 79.4
BcaC08g44793 Brassica carinata HOM05D008477 ORTHO05D021917 3.9e-151 538.5 338 82.2
BcaB02g07648 Brassica carinata HOM05D008477 ORTHO05D016040 7.1e-113 411.4 353 64.6
BraA09t40400Z Brassica rapa HOM05D008477 ORTHO05D024345 9.7e-86 321.2 347 55.3
C08p31850 Brassica napus HOM05D008477 ORTHO05D024345 1.8e-84 317.0 344 55.5
A09p49470 Brassica napus HOM05D008477 ORTHO05D024345 4.5e-83 312.4 371 52.3
BolC8t50804H Brassica oleracea HOM05D008477 ORTHO05D024345 5.9e-83 312.0 344 54.7
BcaC07g39968 Brassica carinata HOM05D008477 ORTHO05D024345 1.4e-79 300.8 337 54.0
BcaC07g40139 Brassica carinata HOM05D008477 ORTHO05D012146 1.3e-77 294.3 368 51.9
C01p33000 Brassica napus HOM05D008477 ORTHO05D016040 8.8e-71 271.6 339 48.1
BcaC09g49781 Brassica carinata HOM05D008477 ORTHO05D016040 1.8e-63 247.3 139 81.3
BolC7t41496H Brassica oleracea HOM05D008477 ORTHO05D016040 2.3e-63 246.9 337 44.5
BolC1t03239H Brassica oleracea HOM05D008477 ORTHO05D016040 4.3e-57 226.1 339 43.4
BolC4t23752H Brassica oleracea HOM05D008477 ORTHO05D016040 2.0e-51 207.2 139 69.8
BcaC02g10997 Brassica carinata HOM05D008477 ORTHO05D016040 1.1e-49 201.4 131 72.5
BcaC03g16257 Brassica carinata HOM05D008477 ORTHO05D016040 9.5e-49 198.4 308 42.2
C04p22350 Brassica napus HOM05D008477 ORTHO05D016040 3.0e-42 176.8 124 66.9
Thhalv10006451m.g Eutrema salsugineum HOM05D008477 ORTHO05D012146 2.1e-40 170.6 143 58.7
Thhalv10027901m.g Eutrema salsugineum HOM05D008477 ORTHO05D012146 3.1e-39 166.8 158 51.3
AL5G37870 Arabidopsis lyrata HOM05D008477 ORTHO05D012146 4.4e-38 162.9 146 53.4
Sp7g00810 Schrenkiella parvula HOM05D008477 ORTHO05D012146 1.4e-36 157.9 154 51.9
BcaB02g07910 Brassica carinata HOM05D008477 ORTHO05D012146 3.0e-34 150.2 156 48.1
BcaC08g44507 Brassica carinata HOM05D008477 ORTHO05D012146 3.0e-34 150.2 156 46.8
C06p19590 Brassica napus HOM05D008477 ORTHO05D012146 3.0e-34 150.2 156 46.8
BolC6t37152H Brassica oleracea HOM05D008477 ORTHO05D012146 3.0e-34 150.2 156 46.8
AT3G56520 Arabidopsis thaliana HOM05D008477 ORTHO05D012146 1.9e-33 147.5 155 47.7
C05p36490 Brassica napus HOM05D008477 ORTHO05D039864 1.9e-33 147.5 90 80.0
A07p20670 Brassica napus HOM05D008477 ORTHO05D012146 5.6e-33 146.0 156 47.4
C04p48180 Brassica napus HOM05D008477 ORTHO05D012146 5.6e-33 146.0 160 48.8
BraA07t29758Z Brassica rapa HOM05D008477 ORTHO05D012146 5.6e-33 146.0 156 47.4
BolC4t26408H Brassica oleracea HOM05D008477 ORTHO05D012146 9.6e-33 145.2 160 48.8
BcaB06g27594 Brassica carinata HOM05D008477 ORTHO05D012146 2.4e-31 140.6 158 48.1
A04p14140 Brassica napus HOM05D008477 ORTHO05D012146 2.4e-31 140.6 160 48.1
BraA04t17075Z Brassica rapa HOM05D008477 ORTHO05D012146 2.4e-31 140.6 160 48.1
AL7G48460 Arabidopsis lyrata HOM05D008477 ORTHO05D012146 1.7e-29 134.4 162 44.4
AT5G41090 Arabidopsis thaliana HOM05D008477 ORTHO05D012146 2.9e-29 133.7 157 43.9
A09p30100 Brassica napus HOM05D008477 ORTHO05D012146 2.1e-27 127.5 121 56.2
CARHR213280 Cardamine hirsuta HOM05D008477 ORTHO05D012146 2.1e-27 127.5 154 43.5
AL5G16460 Arabidopsis lyrata HOM05D008477 ORTHO05D012146 3.9e-26 123.2 151 41.7
Carub.0007s3440 Capsella rubella HOM05D008477 ORTHO05D012146 2.0e-22 110.9 161 40.4
BraA02t07762Z Brassica rapa HOM05D008477 ORTHO05D016040 9.9e-22 108.6 258 32.6
BcaC05g27661 Brassica carinata HOM05D008477 ORTHO05D039864 8.4e-21 105.5 62 85.5
BolC2t10069H Brassica oleracea HOM05D008477 ORTHO05D016040 2.1e-19 100.9 59 78.0
Aa31LG9G800 Aethionema arabicum HOM05D008477 ORTHO05D012146 2.5e-17 94.0 155 36.8
BcaC06g35844 Brassica carinata HOM05D008477 ORTHO05D094011 3.4e-14 83.6 64 67.2
A04p02820 Brassica napus HOM05D010123 ORTHO05D012290 3.3e-09 67.0 107 43.0
BcaC02g09975 Brassica carinata HOM05D010123 ORTHO05D012290 7.4e-09 65.9 124 43.5
BcaC02g09978 Brassica carinata HOM05D010123 ORTHO05D012290 7.4e-09 65.9 124 43.5
C04p34410 Brassica napus HOM05D010123 ORTHO05D012290 7.4e-09 65.9 124 43.5
BolC4t25003H Brassica oleracea HOM05D010123 ORTHO05D012290 7.4e-09 65.9 124 43.5
AL5G39610 Arabidopsis lyrata HOM05D010123 ORTHO05D012290 1.3e-08 65.1 159 34.0
Dinv10529 Davidia involucrata HOM05D000010 ORTHO05D011092 2.8e-08 63.9 151 28.5
Sp5g04760 Schrenkiella parvula HOM05D010123 ORTHO05D012290 4.8e-08 63.2 153 35.9
Thecc.05G157000 Theobroma cacao HOM05D000010 ORTHO05D045173 4.8e-08 63.2 176 26.7
MSTRG.24113 Avicennia marina HOM05D000010 ORTHO05D001550 6.2e-08 62.8 141 29.8
Carub.0005s2480 Capsella rubella HOM05D010123 ORTHO05D012290 1.1e-07 62.0 119 37.0
BraA04t16006Z Brassica rapa HOM05D010123 ORTHO05D012290 1.4e-07 61.6 169 35.5
Potri.017G063300 Populus trichocarpa HOM05D000010 ORTHO05D001550 1.8e-07 61.2 112 30.4
Haze_14916 Corylus avellana HOM05D000010 ORTHO05D001550 2.4e-07 60.8 161 27.3
CAN.G234.20 Capsicum annuum HOM05D000010 ORTHO05D003912 4.0e-07 60.1 153 26.8
Cc01_g11320 Coffea canephora HOM05D000010 ORTHO05D000151 4.0e-07 60.1 113 32.7
AT3G57960 Arabidopsis thaliana HOM05D010123 ORTHO05D012290 5.3e-07 59.7 83 41.0
Potri.001G325100 Populus trichocarpa HOM05D000010 ORTHO05D001550 9.0e-07 58.9 160 26.9
Sed0014490 Sechium edule HOM05D000010 ORTHO05D000865 2.0e-06 57.8 141 27.7
Gohir.A08G231300 Gossypium hirsutum HOM05D000010 ORTHO05D000063 2.6e-06 57.4 168 29.2
Nitab4.5_0005898g0020 Nicotiana tabacum HOM05D000010 ORTHO05D003912 2.6e-06 57.4 153 25.5
AUR62005772 Chenopodium quinoa HOM05D000010 ORTHO05D000865 4.5e-06 56.6 146 25.3
AUR62044373 Chenopodium quinoa HOM05D000010 ORTHO05D000865 4.5e-06 56.6 146 25.3
Sed0027874 Sechium edule HOM05D000010 ORTHO05D000865 4.5e-06 56.6 105 29.5
THA.LOC104822915 Tarenaya hassleriana HOM05D000010 ORTHO05D000865 4.5e-06 56.6 108 28.7
BcaC08g44881 Brassica carinata HOM05D010123 ORTHO05D012290 5.8e-06 56.2 82 42.7
Gorai.007G188800 Gossypium raimondii HOM05D000010 ORTHO05D000063 5.8e-06 56.2 107 31.8
Peaxi162Scf00875g00111 Petunia axillaris HOM05D000010 ORTHO05D003912 5.8e-06 56.2 153 25.5
Sopen10g025590 Solanum pennellii HOM05D000010 ORTHO05D003912 5.8e-06 56.2 153 24.8
Aa31LG7G8280 Aethionema arabicum HOM05D000010 ORTHO05D000865 7.6e-06 55.8 146 24.7
BcaB02g08286 Brassica carinata HOM05D010123 ORTHO05D012290 7.6e-06 55.8 81 46.9
C05p24090 Brassica napus HOM05D000010 ORTHO05D000865 7.6e-06 55.8 138 25.4
C06p24980 Brassica napus HOM05D010123 ORTHO05D012290 7.6e-06 55.8 73 42.5
BolC6t37650H Brassica oleracea HOM05D010123 ORTHO05D012290 7.6e-06 55.8 73 42.5
CARHR025090 Cardamine hirsuta HOM05D000010 ORTHO05D000865 7.6e-06 55.8 104 28.8
Duzib147G0956 Durio zibethinus HOM05D000010 ORTHO05D001550 7.6e-06 55.8 142 26.8
Thhalv10007709m.g Eutrema salsugineum HOM05D000010 ORTHO05D000865 7.6e-06 55.8 104 28.8
Gorai.004G268400 Gossypium raimondii HOM05D000010 ORTHO05D000063 7.6e-06 55.8 167 28.7
Manes.01G186100 Manihot esculenta HOM05D000010 ORTHO05D000865 7.6e-06 55.8 104 27.9
Sed0003881 Sechium edule HOM05D000010 ORTHO05D000865 7.6e-06 55.8 164 23.8
Solyc10g055760.2 Solanum lycopersicum HOM05D000010 ORTHO05D003912 7.6e-06 55.8 153 24.8
BcaB03g12013 Brassica carinata HOM05D000010 ORTHO05D000865 1.0e-05 55.5 103 29.1
BcaC07g39262 Brassica carinata HOM05D000010 ORTHO05D000865 1.0e-05 55.5 103 29.1
A08p27610 Brassica napus HOM05D000010 ORTHO05D000865 1.0e-05 55.5 103 28.2
C08p22720 Brassica napus HOM05D000010 ORTHO05D000865 1.0e-05 55.5 103 29.1
BolC8t49909H Brassica oleracea HOM05D000010 ORTHO05D000865 1.0e-05 55.5 103 29.1
Migut.D02201 Erythranthe guttata HOM05D000010 ORTHO05D000151 1.0e-05 55.5 113 31.9
Gohir.D08G251700 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.0e-05 55.5 168 28.6
Manes.06G123900 Manihot esculenta HOM05D000010 ORTHO05D001550 1.0e-05 55.5 103 34.0


User provided reference genes

Program Settings