Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BNapus_Darmor_BZH_scaffold_287p00230 Brassica napus HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
C06p23070 Brassica napus HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
C09p40530 Brassica napus HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
BolSC29t60480H Brassica oleracea HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
BolSC35t60660H Brassica oleracea HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
BolSC35t60739H Brassica oleracea HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
BolSC47t61084H Brassica oleracea HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
BraSC58t46434Z Brassica rapa HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
BraSC59t46580Z Brassica rapa HOM05D010788 ORTHO05D016131 1.8e-30 135.2 66 100.0
C02p28690 Brassica napus HOM05D010788 ORTHO05D016131 2.0e-29 131.7 66 98.5
BolC6t36201H Brassica oleracea HOM05D010788 ORTHO05D016131 2.0e-29 131.7 66 98.5
BraSC138t45562Z Brassica rapa HOM05D010788 ORTHO05D107831 6.1e-26 120.2 63 92.1
BolC7t41718H Brassica oleracea HOM05D010788 ORTHO05D042511 7.2e-19 96.7 43 100.0
BolSC46t61011H Brassica oleracea HOM05D010788 ORTHO05D106834 7.2e-19 96.7 43 100.0
C02p43610 Brassica napus HOM05D010788 ORTHO05D042511 8.0e-18 93.2 43 97.7
BolC2t08919H Brassica oleracea HOM05D010788 ORTHO05D106321 1.2e-16 89.4 43 95.3
BNapus_Darmor_BZH_scaffold_253p00260 Brassica napus HOM05D010788 ORTHO05D033788 1.7e-07 58.9 35 82.9
ATCG00670 Arabidopsis thaliana HOM05D000274 ORTHO05D002552 3.7e-07 57.8 24 100.0
BraA06t25375Z Brassica rapa HOM05D010788 ORTHO05D033788 3.7e-07 57.8 24 100.0
BraSC58t46496Z Brassica rapa HOM05D010788 ORTHO05D033788 3.7e-07 57.8 24 100.0
CARHR282180 Cardamine hirsuta HOM05D000274 ORTHO05D002552 3.7e-07 57.8 24 100.0
LjContig00318g0024179 Lotus japonicus HOM05D000274 ORTHO05D002552 3.2e-06 54.7 43 58.1


User provided reference genes

Program Settings