Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 1.6e-56 222.6 118 100.0
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.2e-53 213.0 118 95.8
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 1.6e-53 212.6 118 95.8
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 3.6e-53 211.5 118 94.9
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 4.7e-53 211.1 118 94.9
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 6.2e-53 210.7 119 95.8
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 3.3e-46 188.3 118 82.2
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 6.2e-45 184.1 118 82.2
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 6.2e-45 184.1 118 82.2
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 1.8e-44 182.6 117 81.2
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 2.3e-44 182.2 115 82.6
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.1e-44 181.8 118 81.4
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.1e-44 181.8 118 82.2
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 4.0e-44 181.4 95 100.0
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 4.0e-44 181.4 118 80.5
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 1.2e-43 179.9 117 81.2
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 1.2e-43 179.9 117 81.2
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 1.5e-43 179.5 117 78.6
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 7.5e-43 177.2 121 78.5
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 8.3e-42 173.7 117 78.6
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 1.1e-41 173.3 117 77.8
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 1.4e-41 172.9 117 78.6
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 2.4e-41 172.2 118 79.7
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 5.4e-41 171.0 115 77.4
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 5.4e-41 171.0 115 77.4
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 5.4e-41 171.0 115 77.4
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 1.3e-39 166.4 109 78.9
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 1.5e-38 162.9 117 74.4
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 1.9e-38 162.5 93 92.5
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 1.6e-37 159.5 105 81.0
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 4.7e-37 157.9 103 80.6
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 1.1e-36 156.8 120 76.7
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.4e-36 156.4 114 71.9
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.3e-36 155.6 103 79.6
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 3.1e-36 155.2 118 68.6
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 3.1e-36 155.2 119 67.2
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 4.0e-36 154.8 117 69.2
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 4.0e-36 154.8 117 69.2
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 1.2e-35 153.3 118 68.6
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 7.6e-35 150.6 105 77.1
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 3.8e-34 148.3 116 70.7
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 3.2e-33 145.2 95 77.9
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 1.6e-32 142.9 79 96.2
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 2.7e-32 142.1 117 63.2
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.0e-31 140.2 100 74.0
Gorai.011G046100 Gossypium raimondii HOM05D007792 ORTHO05D009931 2.3e-31 139.0 103 72.8
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.0e-31 138.7 100 74.0
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 4.3e-30 134.8 104 71.2
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 2.1e-29 132.5 84 82.1
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.4e-28 129.8 86 77.9
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 4.0e-28 128.3 118 63.6
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.2e-27 126.7 86 75.6
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.5e-27 126.3 86 76.7
Gohir.D01G169022 Gossypium hirsutum HOM05D007792 ORTHO05D009931 4.9e-26 121.3 95 69.5
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 4.2e-25 118.2 71 88.7
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 5.4e-25 117.9 73 82.2
Glyma.01G201700 Glycine max HOM05D007792 ORTHO05D009931 7.1e-25 117.5 118 55.1
Gorai.002G210300 Gossypium raimondii HOM05D007792 ORTHO05D009931 4.6e-24 114.8 89 68.5
Gorai.001G063300 Gossypium raimondii HOM05D007792 ORTHO05D009931 7.8e-24 114.0 100 65.0
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 5.1e-23 111.3 78 74.4
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 1.1e-22 110.2 92 60.9
Nitab4.5_0007104g0100 Nicotiana tabacum HOM05D007792 ORTHO05D009931 2.5e-22 109.0 79 70.9
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 5.6e-22 107.8 82 72.0
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 5.6e-22 107.8 82 72.0
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 5.6e-22 107.8 82 72.0
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 5.6e-22 107.8 82 72.0
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 1.6e-21 106.3 115 53.9
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 3.6e-21 105.1 88 65.9
arahy.Tifrunner.gnm1.ann1.81C611 Arachis hypogaea HOM05D007792 ORTHO05D009931 1.2e-19 100.1 115 50.4
arahy.Tifrunner.gnm1.ann1.4Z8JUD Arachis hypogaea HOM05D007792 ORTHO05D009931 2.6e-19 99.0 95 54.7
Gohir.A10G134900 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.2e-16 90.1 118 50.0
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 1.3e-13 80.1 70 62.9
BraSC103t45475Z Brassica rapa HOM05D007792 ORTHO05D009931 2.4e-12 75.9 61 70.5
CiPaw.07G076700 Carya illinoinensis HOM05D007792 ORTHO05D009931 2.6e-11 72.4 62 56.5
MD11G1294300 Malus domestica HOM05D007792 ORTHO05D009931 2.6e-11 72.4 42 88.1
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 3.8e-10 68.6 53 62.3
Eucgr.D02558 Eucalyptus grandis HOM05D007792 ORTHO05D009931 4.9e-10 68.2 55 67.3
Phvul.004G105000 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 2.1e-08 62.8 103 44.7
EL10Ac4g08243 Beta vulgaris HOM05D007792 ORTHO05D009931 6.7e-07 57.8 95 48.4
Haze_16244 Corylus avellana HOM05D004456 ORTHO05D005287 1.1e-06 57.0 89 38.2
TWI60G0757 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 2.5e-06 55.8 82 37.8
TWI81G0537 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 4.3e-06 55.1 82 40.2
unitig_92.g28171 Utricularia gibba HOM05D004456 ORTHO05D005287 4.3e-06 55.1 82 40.2
CiPaw.01G092700 Carya illinoinensis HOM05D004456 ORTHO05D005287 5.6e-06 54.7 89 37.1
Duzib235G0097 Durio zibethinus HOM05D004456 ORTHO05D005287 5.6e-06 54.7 82 40.2
Hund17691 Selenicereus undatus HOM05D004456 ORTHO05D005287 5.6e-06 54.7 89 37.1
Migut.M01892 Erythranthe guttata HOM05D004456 ORTHO05D005287 7.4e-06 54.3 89 38.2
Migut.M01926 Erythranthe guttata HOM05D004456 ORTHO05D005287 7.4e-06 54.3 89 38.2
Gohir.D11G338800 Gossypium hirsutum HOM05D004456 ORTHO05D005287 7.4e-06 54.3 82 39.0
Gorai.007G368500 Gossypium raimondii HOM05D004456 ORTHO05D005287 7.4e-06 54.3 82 39.0
Potri.017G119300 Populus trichocarpa HOM05D004456 ORTHO05D005287 7.4e-06 54.3 82 39.0
PRCOL_00003603 Prasinoderma coloniale HOM05D004456 ORTHO05D005287 7.4e-06 54.3 88 39.8
Sabra17G0098500 Salix brachista HOM05D004456 ORTHO05D005287 7.4e-06 54.3 89 37.1
SalBow7G3040 Salvia bowleyana HOM05D004456 ORTHO05D005287 7.4e-06 54.3 82 39.0
SGA_v2.0_scaffold223G42863 Striga asiatica HOM05D004456 ORTHO05D005287 7.4e-06 54.3 82 39.0
GSVIVG01015827001 Vitis vinifera HOM05D004456 ORTHO05D005287 7.4e-06 54.3 89 38.2
Ah.06g192000 Amaranthus hybridus HOM05D004456 ORTHO05D005287 9.6e-06 53.9 89 37.1
unitig_37.g12076 Utricularia gibba HOM05D004456 ORTHO05D005287 9.6e-06 53.9 82 39.0


User provided reference genes

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