Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BNapus_Darmor_BZH_scaffold_287p00210 Brassica napus HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
C06p22940 Brassica napus HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
C06p23050 Brassica napus HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BolSC29t60478H Brassica oleracea HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BolSC29t60599H Brassica oleracea HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BolSC35t60658H Brassica oleracea HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BolSC46t61009H Brassica oleracea HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BolSC46t61026H Brassica oleracea HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BolSC47t61085H Brassica oleracea HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BraSC138t45564Z Brassica rapa HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BraSC25t45854Z Brassica rapa HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
BraSC58t46433Z Brassica rapa HOM05D008747 ORTHO05D010943 3.3e-29 131.0 63 100.0
C04p42960 Brassica napus HOM05D008747 ORTHO05D010943 3.4e-26 120.9 63 92.1
BolSC35t60740H Brassica oleracea HOM05D008747 ORTHO05D010943 2.9e-25 117.9 66 92.4
BraSC103t45476Z Brassica rapa HOM05D008747 ORTHO05D010943 3.2e-24 114.4 63 90.5
C02p28710 Brassica napus HOM05D008747 ORTHO05D010943 4.3e-21 104.0 63 85.7
BraSC58t46494Z Brassica rapa HOM05D008747 ORTHO05D010943 2.4e-19 98.2 66 84.8
Lalb_Chr07g0192051 Lupinus albus HOM05D008747 ORTHO05D010943 2.1e-15 85.1 41 97.6
Glyma.14G213500 Glycine max HOM05D008747 ORTHO05D010943 6.1e-15 83.6 41 95.1
Gohir.A12G229300 Gossypium hirsutum HOM05D008747 ORTHO05D010943 2.3e-14 81.6 41 95.1
Gohir.D01G102008 Gossypium hirsutum HOM05D008747 ORTHO05D010943 2.3e-14 81.6 41 95.1
Gohir.D12G107700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 2.3e-14 81.6 41 95.1
ATCG00065 Arabidopsis thaliana HOM05D008747 ORTHO05D010943 3.0e-14 81.3 38 100.0
Phvul.002G090400 Phaseolus vulgaris HOM05D008747 ORTHO05D010943 5.1e-14 80.5 41 92.7
Gohir.A03G081900 Gossypium hirsutum HOM05D008747 ORTHO05D010943 8.7e-14 79.7 41 92.7
Gohir.A06G008400 Gossypium hirsutum HOM05D008747 ORTHO05D010943 8.7e-14 79.7 41 92.7
Solyc00g500069.1 Solanum lycopersicum HOM05D008747 ORTHO05D010943 1.9e-13 78.6 37 100.0
Gohir.D07G185800 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.3e-13 77.8 41 87.8
Gohir.D07G175050 Gossypium hirsutum HOM05D008747 ORTHO05D010943 5.7e-13 77.0 39 92.3
arahy.Tifrunner.gnm1.ann1.HJLG3A Arachis hypogaea HOM05D008747 ORTHO05D010943 7.4e-13 76.6 43 86.0
Gohir.D06G104700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 7.4e-13 76.6 41 90.2
arahy.Tifrunner.gnm1.ann1.2D3TTC Arachis hypogaea HOM05D008747 ORTHO05D010943 1.3e-12 75.9 36 97.2
Gohir.D06G113700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.7e-12 74.3 41 87.8
arahy.Tifrunner.gnm1.ann1.97L4DF Arachis hypogaea HOM05D008747 ORTHO05D010943 4.8e-12 73.9 35 97.1
arahy.Tifrunner.gnm1.ann1.VB0WZA Arachis hypogaea HOM05D008747 ORTHO05D010943 6.3e-12 73.6 43 83.7
Potri.001G305350 Populus trichocarpa HOM05D008747 ORTHO05D010943 6.3e-12 73.6 41 87.8
Gohir.D01G169000 Gossypium hirsutum HOM05D008747 ORTHO05D010943 8.2e-12 73.2 41 87.8
Gohir.D06G125250 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.4e-11 72.4 41 82.9
Gohir.D01G169110 Gossypium hirsutum HOM05D008747 ORTHO05D010943 4.1e-11 70.9 41 82.9
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 5.3e-11 70.5 37 89.2
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 5.3e-11 70.5 37 89.2
BNapus_Darmor_BZH_scaffold_253p00250 Brassica napus HOM05D008747 ORTHO05D010943 7.2e-08 60.1 28 100.0
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 4.6e-07 57.4 34 76.5
Peaxi162Scf01751g00007 Petunia axillaris HOM05D008747 ORTHO05D010943 4.6e-07 57.4 27 100.0
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.3e-06 55.1 34 73.5


User provided reference genes

Program Settings