Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p22900 Brassica napus HOM05D008377 ORTHO05D010569 1.7e-16 88.2 44 100.0
ATCG00700 Arabidopsis thaliana HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BNapus_Darmor_BZH_scaffold_253p00290 Brassica napus HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BNapus_Darmor_BZH_scaffold_57p00030 Brassica napus HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
C06p23090 Brassica napus HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolC7t41714H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC29t60483H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC29t60603H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC35t60663H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC35t60736H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC46t61014H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC47t61081H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolSC49t61169H Brassica oleracea HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BraA06t25379Z Brassica rapa HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BraSC103t45450Z Brassica rapa HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BraSC138t45559Z Brassica rapa HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BraSC59t46577Z Brassica rapa HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
CAN.G131.6 Capsicum annuum HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
CAN.G1513.9 Capsicum annuum HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
CAN.G1739.5 Capsicum annuum HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
DCAR_032513 Daucus carota HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
Hma1.2p1_2223F.1_g317403 Hydrangea macrophylla HOM05D008377 ORTHO05D010569 1.1e-15 85.5 44 97.7
BolC2t08917H Brassica oleracea HOM05D008377 ORTHO05D010569 1.9e-15 84.7 44 95.5
Gohir.A01G140181 Gossypium hirsutum HOM05D008377 ORTHO05D010569 3.2e-15 84.0 44 95.5
unitig_91.g26511 Utricularia gibba HOM05D000964 ORTHO05D003870 4.2e-15 83.6 44 93.2
PSO548G0017 Papaver somniferum HOM05D008377 ORTHO05D010569 5.5e-15 83.2 44 95.5
Medtr2g062940 Medicago truncatula HOM05D008377 ORTHO05D010569 7.2e-15 82.8 43 90.7
vmacro22409 Vaccinium macrocarpon HOM05D008377 ORTHO05D010569 7.2e-15 82.8 44 93.2
Gohir.1Z078701 Gossypium hirsutum HOM05D008377 ORTHO05D010569 9.4e-15 82.4 44 95.5
Gohir.A09G043766 Gossypium hirsutum HOM05D008377 ORTHO05D010569 9.4e-15 82.4 44 95.5
Potri.011G113700 Populus trichocarpa HOM05D008377 ORTHO05D010569 9.4e-15 82.4 44 95.5
Potri.019G028300 Populus trichocarpa HOM05D008377 ORTHO05D010569 9.4e-15 82.4 44 95.5
PGR111G0081 Punica granatum HOM05D008377 ORTHO05D010569 9.4e-15 82.4 44 95.5
CAN.G1263.26 Capsicum annuum HOM05D008377 ORTHO05D010569 2.1e-14 81.3 44 90.9
BraSC58t46436Z Brassica rapa HOM05D008377 ORTHO05D010569 2.7e-14 80.9 45 95.6
Migut.I00398 Erythranthe guttata HOM05D008377 ORTHO05D010569 2.7e-14 80.9 41 95.1
Potri.011G074784 Populus trichocarpa HOM05D008377 ORTHO05D010569 2.7e-14 80.9 44 93.2
AL7G50300 Arabidopsis lyrata HOM05D008377 ORTHO05D010569 3.6e-14 80.5 43 93.0
BolSC29t60632H Brassica oleracea HOM05D008377 ORTHO05D010569 3.6e-14 80.5 40 100.0
Potri.007G062182 Populus trichocarpa HOM05D008377 ORTHO05D010569 3.6e-14 80.5 41 97.6
Potri.009G004950 Populus trichocarpa HOM05D008377 ORTHO05D010569 4.7e-14 80.1 42 92.9
Glyma.U031425 Glycine max HOM05D008377 ORTHO05D010569 6.1e-14 79.7 44 90.9
Gohir.A12G178625 Gossypium hirsutum HOM05D008377 ORTHO05D010569 8.0e-14 79.3 44 93.2
Gohir.A12G178660 Gossypium hirsutum HOM05D008377 ORTHO05D010569 8.0e-14 79.3 44 93.2
Nn4g25236 Nelumbo nucifera HOM05D008377 ORTHO05D010569 8.0e-14 79.3 42 95.2
CiPaw.10G124700 Carya illinoinensis HOM05D008377 ORTHO05D010569 1.0e-13 79.0 43 90.7
Pp3c21_5640 Physcomitrium patens HOM05D008377 ORTHO05D010569 2.3e-13 77.8 44 88.6
CAN.G634.5 Capsicum annuum HOM05D008377 ORTHO05D010569 3.0e-13 77.4 44 86.4
Gohir.A05G326908 Gossypium hirsutum HOM05D008377 ORTHO05D010569 4.0e-13 77.0 44 88.6
Gohir.D11G238201 Gossypium hirsutum HOM05D008377 ORTHO05D010569 1.2e-12 75.5 44 88.6
Dinv33424 Davidia involucrata HOM05D000421 ORTHO05D000855 2.0e-12 74.7 38 97.4
CAN.G2018.10 Capsicum annuum HOM05D008377 ORTHO05D010569 4.4e-12 73.6 44 84.1
Gohir.D09G048400 Gossypium hirsutum HOM05D008377 ORTHO05D010569 9.8e-12 72.4 44 86.4
Gorai.006G061700 Gossypium raimondii HOM05D008377 ORTHO05D010569 1.7e-11 71.6 44 86.4
Gorai.007G252000 Gossypium raimondii HOM05D008377 ORTHO05D010569 2.2e-11 71.2 44 81.8
Gohir.A06G115402 Gossypium hirsutum HOM05D008377 ORTHO05D010569 8.3e-11 69.3 40 87.5
SHI42879 Sapria himalayana HOM05D008377 ORTHO05D010569 8.5e-08 59.3 33 87.9
Cfa021572 Carpinus fangiana HOM05D000964 ORTHO05D003870 2.5e-07 57.8 27 96.3
GSVIVG01021001001 Vitis vinifera HOM05D000755 ORTHO05D000642 5.5e-07 56.6 43 67.4
CAN.G726.11 Capsicum annuum HOM05D008377 ORTHO05D010569 2.7e-06 54.3 44 72.7
Nn314s46300 Nelumbo nucifera HOM05D008377 ORTHO05D010569 4.7e-06 53.5 40 72.5


User provided reference genes

Program Settings