Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p21690 Brassica napus HOM05D000055 ORTHO05D041746 1.2e-28 129.0 61 100.0
BolC6t37358H Brassica oleracea HOM05D000055 ORTHO05D041746 1.2e-28 129.0 61 100.0
AT3G53930 Arabidopsis thaliana HOM05D000055 ORTHO05D001675 9.7e-10 66.2 46 69.6
Thhalv10010160m.g Eutrema salsugineum HOM05D000055 ORTHO05D001675 9.7e-10 66.2 46 69.6
Carub.0005s2050 Capsella rubella HOM05D000055 ORTHO05D001675 2.2e-09 65.1 46 67.4
BcaB02g08501 Brassica carinata HOM05D000055 ORTHO05D001675 4.8e-09 63.9 46 67.4
A04p05830 Brassica napus HOM05D000055 ORTHO05D001675 4.8e-09 63.9 46 67.4
BraA04t16280Z Brassica rapa HOM05D000055 ORTHO05D001675 4.8e-09 63.9 46 67.4
AL5G34910 Arabidopsis lyrata HOM05D000055 ORTHO05D001675 8.2e-09 63.2 46 65.2
BcaC02g09123 Brassica carinata HOM05D000055 ORTHO05D001675 1.4e-08 62.4 46 67.4
C04p38670 Brassica napus HOM05D000055 ORTHO05D001675 1.4e-08 62.4 46 67.4
BolC4t25445H Brassica oleracea HOM05D000055 ORTHO05D001675 1.4e-08 62.4 46 67.4
QL07p028568 Quercus lobata HOM05D000055 ORTHO05D001675 2.4e-08 61.6 46 63.0
THA.LOC104823411 Tarenaya hassleriana HOM05D000055 ORTHO05D001675 2.4e-08 61.6 46 65.2
Lalb_Chr07g0193101 Lupinus albus HOM05D000055 ORTHO05D001675 3.1e-08 61.2 46 60.9
Sp5g08470 Schrenkiella parvula HOM05D000055 ORTHO05D001675 3.1e-08 61.2 46 65.2
AT2G37840 Arabidopsis thaliana HOM05D000055 ORTHO05D001675 9.1e-08 59.7 46 65.2
TWI53G0243 Tripterygium wilfordii HOM05D000055 ORTHO05D001675 9.1e-08 59.7 46 60.9
TWI77G0832 Tripterygium wilfordii HOM05D000055 ORTHO05D001675 9.1e-08 59.7 46 60.9
Carub.0004s1976 Capsella rubella HOM05D000055 ORTHO05D001675 1.2e-07 59.3 46 65.2
Aa31sc88G40 Aethionema arabicum HOM05D000055 ORTHO05D001675 1.5e-07 58.9 46 60.9
CARHR163820 Cardamine hirsuta HOM05D000055 ORTHO05D001675 1.5e-07 58.9 46 58.7
GSVIVG01034089001 Vitis vinifera HOM05D000055 ORTHO05D001675 2.0e-07 58.5 46 58.7
Dinv35552 Davidia involucrata HOM05D000055 ORTHO05D001675 2.6e-07 58.2 46 56.5
MELO3C009226.2 Cucumis melo HOM05D000055 ORTHO05D001675 4.5e-07 57.4 46 58.7
Potri.016G104900 Populus trichocarpa HOM05D000055 ORTHO05D001675 4.5e-07 57.4 41 61.0
AL4G34790 Arabidopsis lyrata HOM05D000055 ORTHO05D001675 5.9e-07 57.0 46 63.0
Sabra06G0070600 Salix brachista HOM05D000055 ORTHO05D001675 5.9e-07 57.0 46 52.2
ClCG10G021490 Citrullus lanatus HOM05D000055 ORTHO05D001675 7.7e-07 56.6 46 58.7
CsaV3_3G034550 Cucumis sativus L. HOM05D000055 ORTHO05D001675 7.7e-07 56.6 46 56.5
Gohir.A04G085400 Gossypium hirsutum HOM05D000055 ORTHO05D001675 7.7e-07 56.6 46 58.7
Gohir.D04G125000 Gossypium hirsutum HOM05D000055 ORTHO05D001675 7.7e-07 56.6 46 58.7
Gorai.012G108100 Gossypium raimondii HOM05D000055 ORTHO05D001675 7.7e-07 56.6 46 58.7
Sed0006565 Sechium edule HOM05D000055 ORTHO05D001675 7.7e-07 56.6 46 58.7
BraA03t11329Z Brassica rapa HOM05D000055 ORTHO05D001675 1.0e-06 56.2 42 66.7
Nn2g13503 Nelumbo nucifera HOM05D000055 ORTHO05D001675 1.0e-06 56.2 46 56.5
BcaC01g05589 Brassica carinata HOM05D000055 ORTHO05D001675 1.3e-06 55.8 42 66.7
C03p24540 Brassica napus HOM05D000055 ORTHO05D001675 1.3e-06 55.8 42 66.7
BolC3t14852H Brassica oleracea HOM05D000055 ORTHO05D001675 1.3e-06 55.8 42 66.7
BcaB01g03749 Brassica carinata HOM05D000055 ORTHO05D001675 1.7e-06 55.5 41 68.3
Eucgr.K03054 Eucalyptus grandis HOM05D000055 ORTHO05D001675 1.7e-06 55.5 46 58.7
Rhsim04G0162700 Rhododendron simsii HOM05D000055 ORTHO05D001675 2.2e-06 55.1 46 54.3
vmacro08632 Vaccinium macrocarpon HOM05D000055 ORTHO05D001675 2.2e-06 55.1 46 56.5
CSS0042370 Camellia sinensis var. sinensis HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 54.3
Lj2A87G48 Lonicera japonica HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 56.5
Manes.09G096800 Manihot esculenta HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 56.5
PGR004G0083 Punica granatum HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 54.3
PGR107G0004 Punica granatum HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 54.3
RcHm_v2.0_Chr3g0465041 Rosa chinensis HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 54.3
Thecc.05G031200 Theobroma cacao HOM05D000055 ORTHO05D001675 2.9e-06 54.7 46 54.3
Cfa017311 Carpinus fangiana HOM05D000055 ORTHO05D001675 3.8e-06 54.3 46 56.5
Dinv37130 Davidia involucrata HOM05D000055 ORTHO05D001675 3.8e-06 54.3 46 54.3
Thhalv10016391m.g Eutrema salsugineum HOM05D000055 ORTHO05D001675 3.8e-06 54.3 46 60.9
GSVIVG01022729001 Vitis vinifera HOM05D000055 ORTHO05D001675 3.8e-06 54.3 46 54.3
Atru.chr8.2076 Acer truncatum HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 54.3
CAN.G502.28 Capsicum annuum HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 52.2
Ca_20657_v3 Cicer arietinum L. HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 54.3
Ciclev10011177m.g Citrus clementina HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 54.3
Duzib128G0746 Durio zibethinus HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 56.5
ECA236G0327 Erigeron canadensis HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 58.7
Lj3g0009590 Lotus japonicus HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 54.3
MD04G1136900 Malus domestica HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 54.3
Potri.006G092900 Populus trichocarpa HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 52.2
TPR.G32523 Trifolium pratense HOM05D000055 ORTHO05D001675 5.0e-06 53.9 46 54.3
FvH4_6g12940 Fragaria vesca HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 54.3
FAN02G1079 Fragaria x ananassa HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 54.3
FAN05G3613 Fragaria x ananassa HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 54.3
FAN09G1756 Fragaria x ananassa HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 54.3
FAN14G4822 Fragaria x ananassa HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 54.3
Lalb_Chr12g0209491 Lupinus albus HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 54.3
Sabra16G0104000 Salix brachista HOM05D000055 ORTHO05D001675 6.5e-06 53.5 46 47.8
A03p20890 Brassica napus HOM05D000055 ORTHO05D001675 8.5e-06 53.1 42 64.3
Cpa.g.sc56.42 Carica papaya HOM05D000055 ORTHO05D001675 8.5e-06 53.1 46 54.3
Prupe.6G262900 Prunus persica HOM05D000055 ORTHO05D001675 8.5e-06 53.1 46 54.3


User provided reference genes

Program Settings