Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p20900 Brassica napus HOM05D005627 ORTHO05D013519 9.5e-98 360.1 178 100.0
BolC7t41687H Brassica oleracea HOM05D005627 ORTHO05D013519 2.7e-84 315.5 178 87.6
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 8.6e-83 310.5 179 88.3
BolC7t41683H Brassica oleracea HOM05D005627 ORTHO05D013519 1.5e-82 309.7 178 86.5
BolC6t38917H Brassica oleracea HOM05D005627 ORTHO05D013519 6.2e-81 304.3 164 90.2
C07p12190 Brassica napus HOM05D005627 ORTHO05D013519 2.6e-79 298.9 165 87.9
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 1.6e-73 279.6 193 75.1
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 1.3e-70 270.0 193 71.5
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 1.1e-50 203.8 188 55.9
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 2.2e-46 189.5 206 49.5
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 2.9e-46 189.1 196 47.4
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 3.8e-46 188.7 188 48.9
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 4.9e-46 188.3 193 49.2
BolC6t37278H Brassica oleracea HOM05D005627 ORTHO05D040269 3.2e-45 185.7 107 93.5
BcaC04g21890 Brassica carinata HOM05D005627 ORTHO05D018690 9.3e-45 184.1 145 71.0
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-43 178.7 169 53.8
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 3.9e-43 178.7 169 53.8
BraA02t07754Z Brassica rapa HOM05D005627 ORTHO05D013519 2.5e-42 176.0 173 52.0
C07p18300 Brassica napus HOM05D005627 ORTHO05D018690 6.2e-41 171.4 135 71.1
C09p26130 Brassica napus HOM05D005627 ORTHO05D018690 6.2e-41 171.4 135 71.9
BcaC06g35245 Brassica carinata HOM05D005627 ORTHO05D018690 8.4e-38 161.0 93 89.2
BraA06t25407Z Brassica rapa HOM05D005627 ORTHO05D018690 4.2e-37 158.7 135 68.9
BraA06t25317Z Brassica rapa HOM05D005627 ORTHO05D013519 6.0e-36 154.8 135 64.4
BolC2t11142H Brassica oleracea HOM05D005627 ORTHO05D018690 1.5e-34 150.2 132 67.4
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 5.9e-31 138.3 85 71.8
BolC7t42340H Brassica oleracea HOM05D005627 ORTHO05D018690 1.3e-30 137.1 80 86.2
C06p38190 Brassica napus HOM05D005627 ORTHO05D040269 3.8e-30 135.6 97 78.4
C08p05920 Brassica napus HOM05D005627 ORTHO05D018690 4.2e-29 132.1 131 61.8
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 1.2e-28 130.6 174 46.0
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 8.8e-27 124.4 204 36.8
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 3.3e-26 122.5 204 36.8
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 2.8e-25 119.4 134 45.5
BraA09t36746Z Brassica rapa HOM05D005627 ORTHO05D013519 2.2e-22 109.8 70 70.0
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 8.5e-22 107.8 204 31.4
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-21 105.5 162 41.4
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 4.7e-20 102.1 193 30.6
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 4.7e-20 102.1 204 30.9
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 6.1e-20 101.7 204 29.9
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 2.0e-18 96.7 204 29.4
BolC7t41411H Brassica oleracea HOM05D005627 ORTHO05D041386 3.3e-18 95.9 91 59.3
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 4.4e-18 95.5 174 32.8
C07p09730 Brassica napus HOM05D005627 ORTHO05D041386 7.4e-18 94.7 91 59.3
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 2.4e-16 89.7 179 31.8
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 5.3e-16 88.6 186 25.8
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 9.1e-16 87.8 204 29.4
BolC8t47414H Brassica oleracea HOM05D005627 ORTHO05D013519 2.6e-15 86.3 88 55.7
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-15 85.9 86 50.0
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 4.5e-15 85.5 186 27.4
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.0e-14 84.3 188 26.6
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.3e-14 84.0 186 26.9
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 1.3e-14 84.0 174 29.9
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 1.3e-14 84.0 186 28.5
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 3.8e-14 82.4 80 51.2
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 3.8e-14 82.4 75 45.3
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 5.0e-14 82.0 186 26.9
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 2.5e-13 79.7 191 27.2
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 3.2e-13 79.3 187 27.8
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 3.2e-13 79.3 189 27.5
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 3.2e-13 79.3 189 25.4
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 4.2e-13 79.0 186 25.3
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 4.2e-13 79.0 136 27.9
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 5.5e-13 78.6 103 33.0
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 7.2e-13 78.2 188 27.1
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 7.2e-13 78.2 202 26.2
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 7.2e-13 78.2 188 27.1
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 7.2e-13 78.2 188 27.1
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 7.2e-13 78.2 202 26.2
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 9.4e-13 77.8 56 57.1
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 1.6e-12 77.0 136 27.2
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 2.7e-12 76.3 198 25.8
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 4.7e-12 75.5 186 26.9
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 4.7e-12 75.5 182 25.3
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 6.1e-12 75.1 182 25.3
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 6.1e-12 75.1 167 28.1
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.4e-11 73.9 186 25.8
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 1.4e-11 73.9 176 27.3
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.8e-11 73.6 210 26.2
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.8e-11 73.6 188 25.5
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.8e-11 73.6 167 27.5
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.3e-11 73.2 189 26.5
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 2.3e-11 73.2 203 25.1
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 2.3e-11 73.2 177 27.1
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 3.0e-11 72.8 167 28.7
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.9e-11 72.4 176 25.6
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 6.7e-11 71.6 172 26.2
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-10 70.9 191 24.1
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 1.1e-10 70.9 181 22.1
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 1.5e-10 70.5 198 22.7
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 2.6e-10 69.7 160 26.9
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 2.6e-10 69.7 131 28.2
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 3.3e-10 69.3 202 24.8
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 3.3e-10 69.3 187 26.2
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 3.3e-10 69.3 128 28.9
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 3.3e-10 69.3 202 24.8
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 5.7e-10 68.6 151 30.5
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 7.4e-10 68.2 176 23.9
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.3e-09 67.4 174 24.7
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 1.3e-09 67.4 131 29.8
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-09 67.0 202 24.3
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 2.2e-09 66.6 202 23.8
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 2.8e-09 66.2 174 24.7
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 3.7e-09 65.9 125 26.4
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 4.8e-09 65.5 186 21.0
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 4.8e-09 65.5 186 22.0
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 6.3e-09 65.1 135 27.4
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 6.3e-09 65.1 182 26.9
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 6.3e-09 65.1 177 24.3
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 8.2e-09 64.7 128 27.3
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-08 64.3 174 24.1
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-08 64.3 146 25.3
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 1.4e-08 63.9 180 23.3
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 1.4e-08 63.9 176 29.5
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.4e-08 63.9 191 25.1
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.1e-08 62.8 174 23.6
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 4.1e-08 62.4 173 26.0
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 4.1e-08 62.4 173 26.0
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 4.1e-08 62.4 123 31.7
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 9.1e-08 61.2 211 23.2
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 1.2e-07 60.8 212 24.5
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 1.2e-07 60.8 212 24.5
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 1.6e-07 60.5 189 24.3
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 1.6e-07 60.5 190 24.7
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 1.6e-07 60.5 189 24.3
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 2.0e-07 60.1 151 27.2
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 2.0e-07 60.1 190 24.7
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 2.0e-07 60.1 80 36.2
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 2.6e-07 59.7 157 29.3
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-07 58.9 135 24.4
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 4.5e-07 58.9 184 26.6
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 4.5e-07 58.9 185 26.5
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 5.9e-07 58.5 186 21.5
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 7.7e-07 58.2 174 23.0
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 1.0e-06 57.8 163 27.0
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 1.0e-06 57.8 163 27.0
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 1.0e-06 57.8 163 27.0
A06p26790 Brassica napus HOM05D005627 ORTHO05D021837 1.3e-06 57.4 65 40.0
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 1.7e-06 57.0 204 23.0
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 2.2e-06 56.6 121 25.6
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 2.2e-06 56.6 121 25.6
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 2.9e-06 56.2 74 29.7
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 3.8e-06 55.8 80 38.8
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 5.0e-06 55.5 156 28.8
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 5.0e-06 55.5 204 24.0
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 6.5e-06 55.1 79 30.4
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 6.5e-06 55.1 79 39.2
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 8.5e-06 54.7 204 24.0
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 8.5e-06 54.7 133 24.1


User provided reference genes

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