Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 1.9e-113 412.5 213 100.0
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 1.9e-113 412.5 213 100.0
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 2.7e-99 365.5 212 90.6
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 3.8e-93 345.1 212 86.8
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 1.1e-92 343.6 212 86.3
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 5.4e-92 341.3 212 85.4
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 5.4e-92 341.3 212 85.4
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 5.1e-90 334.7 215 83.7
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 7.6e-86 320.9 212 78.3
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 5.7e-81 304.7 212 74.1
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 3.3e-73 278.9 212 70.8
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 1.0e-69 267.3 212 67.5
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 5.1e-66 255.0 171 79.5
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 7.0e-55 218.0 213 53.1
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 4.5e-54 215.3 136 77.9
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 1.3e-53 213.8 220 51.4
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 3.6e-51 205.7 138 81.2
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 5.7e-49 198.4 234 49.6
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 2.2e-48 196.4 228 52.2
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.1e-47 194.1 216 52.8
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.4e-47 193.7 211 49.8
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 1.8e-47 193.4 234 48.7
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 7.7e-46 188.0 240 47.1
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.5e-44 183.7 216 48.1
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 3.6e-43 179.1 211 46.9
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 3.0e-42 176.0 229 46.7
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 4.0e-42 175.6 214 48.1
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 5.2e-42 175.3 233 43.8
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 9.8e-41 171.0 215 46.5
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 1.3e-40 170.6 213 46.5
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 3.7e-40 169.1 213 46.5
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 6.3e-40 168.3 215 47.9
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 1.4e-39 167.2 216 43.1
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 1.4e-39 167.2 214 46.3
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 4.1e-39 165.6 276 38.0
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 5.4e-39 165.2 205 46.3
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 1.6e-38 163.7 202 45.5
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 1.0e-37 161.0 236 43.2
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 1.3e-37 160.6 138 65.2
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 1.7e-37 160.2 266 37.2
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 6.5e-37 158.3 238 42.9
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 4.2e-36 155.6 231 42.0
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 7.2e-36 154.8 119 66.4
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 9.4e-36 154.5 268 38.1
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 2.1e-35 153.3 119 65.5
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 6.1e-35 151.8 213 43.7
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 8.0e-35 151.4 245 40.4
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 1.0e-34 151.0 264 37.9
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 1.0e-34 151.0 264 37.9
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.8e-34 150.2 279 36.6
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 2.3e-34 149.8 286 36.0
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 2.3e-34 149.8 306 36.3
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 3.0e-34 149.4 231 44.2
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 5.2e-34 148.7 286 35.7
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 5.2e-34 148.7 231 44.2
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 1.2e-33 147.5 301 34.2
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 1.2e-33 147.5 214 43.0
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 1.5e-33 147.1 297 34.0
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 2.0e-33 146.7 210 41.9
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 2.6e-33 146.4 215 42.8
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 4.4e-33 145.6 246 40.7
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 1.3e-32 144.1 213 40.4
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 1.7e-32 143.7 148 52.0
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 2.2e-32 143.3 277 36.1
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 4.9e-32 142.1 320 35.0
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 8.3e-32 141.4 300 35.3
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 8.3e-32 141.4 298 36.2
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 1.4e-31 140.6 315 34.6
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 1.8e-31 140.2 280 34.3
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 5.4e-31 138.7 262 37.4
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 5.4e-31 138.7 282 36.9
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 7.0e-31 138.3 306 32.4
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 7.0e-31 138.3 177 45.2
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 7.0e-31 138.3 260 37.7
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 9.2e-31 137.9 306 35.9
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 9.2e-31 137.9 256 37.9
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.2e-30 137.5 256 38.3
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 1.6e-30 137.1 217 40.1
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 1.0e-29 134.4 284 35.6
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 2.3e-29 133.3 263 38.0
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 2.3e-29 133.3 304 32.9
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.1e-28 131.0 211 39.3
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 1.5e-28 130.6 150 47.3
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 2.5e-28 129.8 304 33.2
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 2.5e-28 129.8 218 39.9
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 7.3e-28 128.3 178 43.8
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 7.3e-28 128.3 202 40.1
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 7.3e-28 128.3 136 50.0
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 9.5e-28 127.9 304 32.6
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.2e-27 127.5 305 33.4
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.6e-27 127.1 292 34.9
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.6e-27 127.1 201 38.8
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 2.1e-27 126.7 317 33.8
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 2.1e-27 126.7 198 41.4
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 2.8e-27 126.3 279 34.4
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 3.6e-27 125.9 326 32.5
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 4.7e-27 125.6 201 37.8
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 1.4e-26 124.0 297 33.0
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 1.4e-26 124.0 165 43.6
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.8e-26 123.6 314 32.8
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 2.3e-26 123.2 299 34.1
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 3.0e-26 122.9 216 41.2
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 4.4e-25 119.0 263 36.1
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 5.7e-25 118.6 227 37.9
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 9.8e-25 117.9 123 53.7
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 9.8e-25 117.9 311 30.9
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 6.4e-24 115.2 315 30.8
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.8e-23 113.6 227 39.6
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 3.2e-23 112.8 214 39.3
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.2e-23 112.8 198 42.9
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 3.2e-23 112.8 319 31.3
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 5.4e-23 112.1 141 47.5
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 7.0e-23 111.7 200 42.0
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 7.0e-23 111.7 214 37.9
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.0e-22 110.2 141 46.8
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 3.5e-22 109.4 314 29.6
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 4.6e-22 109.0 209 34.0
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 6.6e-21 105.1 264 34.5
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 4.7e-19 99.0 323 28.5
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 1.8e-18 97.1 314 29.3
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 3.1e-18 96.3 55 81.8
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 1.7e-16 90.5 138 42.8
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 3.7e-16 89.4 109 45.0
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 2.0e-14 83.6 233 31.8
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 1.7e-13 80.5 218 32.6
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 5.0e-13 79.0 65 69.2
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 1.1e-10 71.2 155 35.5
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.6e-09 66.6 101 38.6
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 2.2e-08 63.5 75 46.7


User provided reference genes

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