Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p17200 Brassica napus HOM05D012343 ORTHO05D017676 1.4e-67 259.6 144 100.0
BolC6t36918H Brassica oleracea HOM05D012343 ORTHO05D017676 1.4e-67 259.6 144 100.0
C04p07010 Brassica napus HOM05D012343 ORTHO05D017676 3.3e-64 248.4 144 90.3
BolC4t22322H Brassica oleracea HOM05D012343 ORTHO05D017676 3.3e-64 248.4 144 90.3
C03p23710 Brassica napus HOM05D012343 ORTHO05D017676 7.3e-32 141.0 159 57.2
BolC3t15103H Brassica oleracea HOM05D012343 ORTHO05D017676 9.5e-32 140.6 160 56.9
BcaC02g12154 Brassica carinata HOM05D012343 ORTHO05D024290 1.1e-16 90.5 148 45.9
BraA06t25830Z Brassica rapa HOM05D012343 ORTHO05D024290 8.4e-12 74.3 40 95.0
BcaC03g14175 Brassica carinata HOM05D000291 ORTHO05D000879 4.6e-10 68.6 94 48.9
C08p30580 Brassica napus HOM05D012343 ORTHO05D102950 4.6e-10 68.6 40 87.5
A06p28850 Brassica napus HOM05D012343 ORTHO05D017676 1.3e-09 67.0 45 77.8
BcaB05g22327 Brassica carinata HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
BcaB08g36078 Brassica carinata HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
BcaC04g19990 Brassica carinata HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
A10p14590 Brassica napus HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
C09p49030 Brassica napus HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
BolC9t57754H Brassica oleracea HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
BraA10t43546Z Brassica rapa HOM05D000291 ORTHO05D000879 9.6e-08 60.8 87 47.1
BraA08t32228Z Brassica rapa HOM05D012343 ORTHO05D017676 1.6e-07 60.1 50 66.0
A02p08660 Brassica napus HOM05D000291 ORTHO05D000879 2.8e-07 59.3 87 46.0
BraA02t05936Z Brassica rapa HOM05D000291 ORTHO05D000879 2.8e-07 59.3 87 46.0
C02p14500 Brassica napus HOM05D000291 ORTHO05D000879 3.7e-07 58.9 91 45.1
BolC2t07574H Brassica oleracea HOM05D000291 ORTHO05D000879 3.7e-07 58.9 91 45.1
CARHR270990 Cardamine hirsuta HOM05D000291 ORTHO05D000879 8.1e-07 57.8 87 44.8
Aa31LG3G13100 Aethionema arabicum HOM05D000291 ORTHO05D000879 1.1e-06 57.4 87 44.8
Thhalv10013043m.g Eutrema salsugineum HOM05D000291 ORTHO05D000879 1.1e-06 57.4 87 44.8
AL8G33170 Arabidopsis lyrata HOM05D000291 ORTHO05D000879 2.4e-06 56.2 87 43.7
AT5G57200 Arabidopsis thaliana HOM05D000291 ORTHO05D000879 2.4e-06 56.2 87 43.7
Carub.0008s1771 Capsella rubella HOM05D000291 ORTHO05D000879 2.4e-06 56.2 87 43.7


User provided reference genes

Program Settings