Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 1.9e-104 382.5 190 100.0
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 1.9e-104 382.5 190 100.0
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 6.4e-76 287.7 223 72.6
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 1.1e-75 287.0 223 72.6
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.1e-75 287.0 223 72.6
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 1.9e-75 286.2 223 72.2
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 1.9e-75 286.2 223 72.2
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 1.2e-74 283.5 223 71.3
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 4.6e-74 281.6 223 71.3
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 6.0e-74 281.2 223 70.0
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 3.0e-73 278.9 223 70.0
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 1.1e-72 276.9 223 69.1
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 1.1e-72 276.9 223 69.5
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 1.6e-71 273.1 220 70.0
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 2.4e-67 259.2 223 63.2
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 5.4e-59 231.5 223 56.5
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 9.3e-51 204.1 223 49.3
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 1.6e-50 203.4 223 49.3
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 7.9e-50 201.1 223 48.9
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 3.9e-49 198.7 222 49.1
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.1e-48 197.2 150 71.3
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 1.5e-48 196.8 222 48.6
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 4.3e-48 195.3 223 48.4
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 4.3e-48 195.3 228 46.9
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 5.6e-48 194.9 222 48.2
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 1.6e-47 193.4 224 50.4
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 6.2e-47 191.4 223 47.1
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 1.8e-46 189.9 227 47.6
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 1.8e-46 189.9 219 48.4
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 4.0e-46 188.7 219 48.4
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 5.3e-46 188.3 220 47.3
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 5.3e-46 188.3 223 46.2
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 1.2e-45 187.2 222 48.2
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.5e-45 186.8 217 47.9
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 3.4e-45 185.7 224 47.8
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 3.4e-45 185.7 219 48.4
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 3.4e-45 185.7 220 47.3
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 3.4e-45 185.7 220 47.7
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 7.6e-45 184.5 219 47.0
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 1.3e-44 183.7 220 45.9
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 1.7e-44 183.3 220 46.4
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 2.9e-44 182.6 219 47.0
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.9e-44 182.6 219 47.0
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 2.9e-44 182.6 219 46.1
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.8e-44 182.2 219 47.0
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 4.9e-44 181.8 219 48.4
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 4.9e-44 181.8 219 46.1
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 6.4e-44 181.4 223 44.4
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 6.4e-44 181.4 218 46.8
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 8.4e-44 181.0 219 47.0
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 8.4e-44 181.0 219 46.6
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 8.4e-44 181.0 219 46.6
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 1.4e-43 180.3 220 45.5
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.4e-43 180.3 219 46.6
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.9e-43 179.9 222 46.4
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 1.9e-43 179.9 228 44.3
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 2.4e-43 179.5 219 45.2
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 2.4e-43 179.5 110 87.3
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 3.2e-43 179.1 220 46.8
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.2e-43 179.1 219 46.6
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 4.2e-43 178.7 223 46.6
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 4.2e-43 178.7 224 45.5
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 4.2e-43 178.7 219 45.2
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 5.5e-43 178.3 223 44.4
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 5.5e-43 178.3 224 46.4
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 7.1e-43 177.9 219 45.2
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 1.2e-42 177.2 219 45.7
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 2.1e-42 176.4 205 47.3
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 2.7e-42 176.0 219 46.6
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 2.7e-42 176.0 224 44.6
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 3.5e-42 175.6 219 44.7
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 3.5e-42 175.6 224 45.5
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 4.6e-42 175.3 220 46.4
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 4.6e-42 175.3 226 46.0
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 6.0e-42 174.9 227 43.2
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 6.0e-42 174.9 223 45.7
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 7.9e-42 174.5 223 45.3
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 1.0e-41 174.1 188 48.9
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 1.0e-41 174.1 224 45.1
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 1.3e-41 173.7 139 71.9
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.8e-41 173.3 224 44.2
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 5.1e-41 171.8 219 45.7
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 5.1e-41 171.8 224 45.1
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 5.1e-41 171.8 220 45.5
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 1.1e-40 170.6 219 45.7
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 1.1e-40 170.6 221 45.7
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 1.1e-40 170.6 219 44.3
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 4.3e-40 168.7 176 50.6
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 2.8e-39 166.0 117 76.9
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 6.2e-39 164.9 190 46.8
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 1.1e-38 164.1 220 43.2
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 6.9e-38 161.4 224 42.9
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 6.9e-38 161.4 222 44.6
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 1.2e-37 160.6 220 41.8
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 2.0e-37 159.8 220 44.1
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 1.0e-36 157.5 223 41.3
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 1.0e-36 157.5 189 48.1
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.9e-36 156.0 218 44.5
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 8.4e-36 154.5 220 43.2
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.2e-34 150.6 219 42.9
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 1.8e-33 146.7 113 75.2
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 3.9e-33 145.6 224 39.3
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 1.9e-32 143.3 217 41.5
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 1.2e-26 124.0 252 37.3
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 1.0e-25 120.9 159 41.5
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 3.3e-24 115.9 220 35.5
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 8.2e-23 111.3 102 54.9
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 1.2e-21 107.5 172 38.4
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 1.2e-21 107.5 167 37.1
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 1.3e-20 104.0 139 46.0
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 4.2e-19 99.0 110 50.0
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 5.0e-12 75.5 51 64.7
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 1.4e-11 73.9 47 70.2
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 7.9e-10 68.2 90 41.1
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea HOM05D005972 ORTHO05D083016 2.3e-09 66.6 66 51.5
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 3.0e-09 66.2 116 36.2
arahy.Tifrunner.gnm1.ann1.03MD5J Arachis hypogaea HOM05D000575 ORTHO05D011349 8.8e-09 64.7 61 52.5
BcaB04g18277 Brassica carinata HOM05D001003 ORTHO05D002734 3.7e-07 59.3 54 63.0
arahy.Tifrunner.gnm1.ann1.9A5XZY Arachis hypogaea HOM05D005972 ORTHO05D031493 8.2e-07 58.2 38 71.1


User provided reference genes

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